BLASTX nr result

ID: Atractylodes21_contig00032961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032961
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26264.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-19
ref|XP_002517126.1| pentatricopeptide repeat-containing protein,...   100   2e-19
ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    97   2e-18
ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18

>emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  100 bits (249), Expect = 1e-19
 Identities = 56/93 (60%), Positives = 65/93 (69%)
 Frame = -2

Query: 281 LASLLQSAVSTRSSVLGRATHARIIKSIHFPFPIFICNHLVNMYXXXXXXXXXXXXXXLI 102
           LASL++SAVST+ S LGRA HA+IIK++  P P FI NHLVNMY              L 
Sbjct: 9   LASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLT 68

Query: 101 PAQNRSVVTWTALISGSVQNGHFSSAILQFSNM 3
           P  NRSVVTWTALI+GSVQNG F+SA+  FSNM
Sbjct: 69  P--NRSVVTWTALIAGSVQNGRFTSALFHFSNM 99


>ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  100 bits (249), Expect = 1e-19
 Identities = 56/93 (60%), Positives = 65/93 (69%)
 Frame = -2

Query: 281 LASLLQSAVSTRSSVLGRATHARIIKSIHFPFPIFICNHLVNMYXXXXXXXXXXXXXXLI 102
           LASL++SAVST+ S LGRA HA+IIK++  P P FI NHLVNMY              L 
Sbjct: 9   LASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLT 68

Query: 101 PAQNRSVVTWTALISGSVQNGHFSSAILQFSNM 3
           P  NRSVVTWTALI+GSVQNG F+SA+  FSNM
Sbjct: 69  P--NRSVVTWTALIAGSVQNGRFTSALFHFSNM 99


>ref|XP_002517126.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543761|gb|EEF45289.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 463

 Score =  100 bits (248), Expect = 2e-19
 Identities = 54/93 (58%), Positives = 63/93 (67%)
 Frame = -2

Query: 281 LASLLQSAVSTRSSVLGRATHARIIKSIHFPFPIFICNHLVNMYXXXXXXXXXXXXXXLI 102
           LA +L+SA+STRSS LGRATHARIIK+   P P F+ NHL++MY              L 
Sbjct: 9   LAPILESAISTRSSFLGRATHARIIKTFQSPLPPFLSNHLISMYSKLDLPNSAQLVLHLT 68

Query: 101 PAQNRSVVTWTALISGSVQNGHFSSAILQFSNM 3
           P   RSVVTWT+LISGSVQNGHFS A+  F NM
Sbjct: 69  P--TRSVVTWTSLISGSVQNGHFSFALYHFFNM 99


>ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14850-like [Cucumis sativus]
          Length = 606

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 53/93 (56%), Positives = 65/93 (69%)
 Frame = -2

Query: 281 LASLLQSAVSTRSSVLGRATHARIIKSIHFPFPIFICNHLVNMYXXXXXXXXXXXXXXLI 102
           LAS+++ AVS RSS+LGRA HA+I+K++  PFP F+ NHLVNMY              L 
Sbjct: 9   LASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELA 68

Query: 101 PAQNRSVVTWTALISGSVQNGHFSSAILQFSNM 3
           P   RSVVTWTALI+GSVQNG F SA+L FS+M
Sbjct: 69  PC--RSVVTWTALIAGSVQNGCFVSALLHFSDM 99


>ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Cucumis sativus]
          Length = 606

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 53/93 (56%), Positives = 65/93 (69%)
 Frame = -2

Query: 281 LASLLQSAVSTRSSVLGRATHARIIKSIHFPFPIFICNHLVNMYXXXXXXXXXXXXXXLI 102
           LAS+++ AVS RSS+LGRA HA+I+K++  PFP F+ NHLVNMY              L 
Sbjct: 9   LASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELA 68

Query: 101 PAQNRSVVTWTALISGSVQNGHFSSAILQFSNM 3
           P   RSVVTWTALI+GSVQNG F SA+L FS+M
Sbjct: 69  PC--RSVVTWTALIAGSVQNGCFVSALLHFSDM 99


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