BLASTX nr result

ID: Atractylodes21_contig00032933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032933
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/...   199   2e-49
emb|CBI27412.3| unnamed protein product [Vitis vinifera]              197   6e-49
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   197   6e-49
dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa...   197   7e-49
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g...   197   7e-49

>ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial
           precursor, putative [Ricinus communis]
           gi|223526524|gb|EEF28786.1| DNA-directed RNA polymerase
           2B, chloroplast/mitochondrial precursor, putative
           [Ricinus communis]
          Length = 589

 Score =  199 bits (506), Expect = 2e-49
 Identities = 91/106 (85%), Positives = 98/106 (92%)
 Frame = -3

Query: 318 CRGILEFAEGRPIGSSGLRWLKIHLANLFAGGVDKLSLEGRIAFTESHLHDIFDSADRPL 139
           CRGILEFAEGRP+G SGLRWLKIHLANLFAGGVDKLS +GRIAFTE+HL DIFDSADRPL
Sbjct: 188 CRGILEFAEGRPLGKSGLRWLKIHLANLFAGGVDKLSYDGRIAFTENHLDDIFDSADRPL 247

Query: 138 DGERWWLNAEDPFQCLAVCIHLAEALRSRSPEATISHIPVHQDGSC 1
           +G+RWWLNAEDPFQCLAVCI L EALRS SPE  ISH+P+HQDGSC
Sbjct: 248 EGKRWWLNAEDPFQCLAVCIDLTEALRSSSPETFISHVPIHQDGSC 293


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  197 bits (502), Expect = 6e-49
 Identities = 89/106 (83%), Positives = 99/106 (93%)
 Frame = -3

Query: 318 CRGILEFAEGRPIGSSGLRWLKIHLANLFAGGVDKLSLEGRIAFTESHLHDIFDSADRPL 139
           CRGILEFAEGRP+G SGLRWLKIHLAN++AGGVDKLS EGR+AFTE+HL DIFDSADRPL
Sbjct: 409 CRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPL 468

Query: 138 DGERWWLNAEDPFQCLAVCIHLAEALRSRSPEATISHIPVHQDGSC 1
           +G RWWL+AEDPFQCLA CI+L+EALRS SPE TISH+PVHQDGSC
Sbjct: 469 EGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSC 514


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
           vinifera]
          Length = 978

 Score =  197 bits (502), Expect = 6e-49
 Identities = 89/106 (83%), Positives = 99/106 (93%)
 Frame = -3

Query: 318 CRGILEFAEGRPIGSSGLRWLKIHLANLFAGGVDKLSLEGRIAFTESHLHDIFDSADRPL 139
           CRGILEFAEGRP+G SGLRWLKIHLAN++AGGVDKLS EGR+AFTE+HL DIFDSADRPL
Sbjct: 577 CRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPL 636

Query: 138 DGERWWLNAEDPFQCLAVCIHLAEALRSRSPEATISHIPVHQDGSC 1
           +G RWWL+AEDPFQCLA CI+L+EALRS SPE TISH+PVHQDGSC
Sbjct: 637 EGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSC 682


>dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa Japonica Group]
           gi|48716846|dbj|BAD23544.1| putative phage-type RNA
           polymerase [Oryza sativa Japonica Group]
           gi|215694941|dbj|BAG90132.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 951

 Score =  197 bits (501), Expect = 7e-49
 Identities = 90/106 (84%), Positives = 98/106 (92%)
 Frame = -3

Query: 318 CRGILEFAEGRPIGSSGLRWLKIHLANLFAGGVDKLSLEGRIAFTESHLHDIFDSADRPL 139
           CRG+LEFAEGRP+G SGLRWLKIHLANL+AGGVDKLS +GRIAFTE+HL DIFDSADRPL
Sbjct: 616 CRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPL 675

Query: 138 DGERWWLNAEDPFQCLAVCIHLAEALRSRSPEATISHIPVHQDGSC 1
           +G+RWWL AEDPFQCLAVCI+L EALRS SPE  ISHIPVHQDGSC
Sbjct: 676 EGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSC 721


>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
           gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
           Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
           single subunit RNA polymerase [Oryza sativa Japonica
           Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
           sativa Japonica Group]
          Length = 1017

 Score =  197 bits (501), Expect = 7e-49
 Identities = 90/106 (84%), Positives = 98/106 (92%)
 Frame = -3

Query: 318 CRGILEFAEGRPIGSSGLRWLKIHLANLFAGGVDKLSLEGRIAFTESHLHDIFDSADRPL 139
           CRG+LEFAEGRP+G SGLRWLKIHLANL+AGGVDKLS +GRIAFTE+HL DIFDSADRPL
Sbjct: 616 CRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPL 675

Query: 138 DGERWWLNAEDPFQCLAVCIHLAEALRSRSPEATISHIPVHQDGSC 1
           +G+RWWL AEDPFQCLAVCI+L EALRS SPE  ISHIPVHQDGSC
Sbjct: 676 EGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSC 721


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