BLASTX nr result

ID: Atractylodes21_contig00032895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032895
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...    61   8e-08
ref|XP_003588816.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    55   5e-06

>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/73 (46%), Positives = 47/73 (64%)
 Frame = -1

Query: 226 EIDQIILYLSMSNTLKRFSFMYMLDNRYKLPTSLFSFQPLETLKLAFCAFEPPLTFNGLS 47
           +ID+ IL+LS S+ +K F        RYK+P+SLFSF+ L  L+L  C  +PPLTF G  
Sbjct: 109 DIDRWILHLSRSS-IKEFILEIWKGQRYKVPSSLFSFEHLIHLELFNCLLQPPLTFKGFR 167

Query: 46  MLKSLYLLYVEIT 8
            LKSL L ++ +T
Sbjct: 168 SLKSLDLQHITLT 180


>ref|XP_003588816.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355477864|gb|AES59067.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 382

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/73 (43%), Positives = 40/73 (54%)
 Frame = -1

Query: 226 EIDQIILYLSMSNTLKRFSFMYMLDNRYKLPTSLFSFQPLETLKLAFCAFEPPLTFNGLS 47
           +IDQ I  +S    +K F     L  RYK+P  LFS Q L+ L+L +C   PP TF G  
Sbjct: 139 DIDQWIFQIS-KRYIKEFVLDIRLKPRYKIPCCLFSCQSLQHLELNYCCLNPPTTFEGFR 197

Query: 46  MLKSLYLLYVEIT 8
            LKSL L  V +T
Sbjct: 198 NLKSLSLFEVTMT 210


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