BLASTX nr result

ID: Atractylodes21_contig00032870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032870
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788...   131   5e-29
emb|CBI36057.3| unnamed protein product [Vitis vinifera]              130   8e-29
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...   126   2e-27
ref|XP_003597674.1| MMS19 nucleotide excision repair protein-lik...   121   5e-26
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ...   117   1e-24

>ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788537 [Glycine max]
          Length = 1135

 Score =  131 bits (330), Expect = 5e-29
 Identities = 63/102 (61%), Positives = 86/102 (84%)
 Frame = -1

Query: 307 TSSCVKHIETYIDSSSSKSPAQQDASLDAIAKLLLNDMITLESLVREMEMYLTITNNIIR 128
           T+   +HIE+Y+DSSS+  PAQQ +SL+A+A L+  D + LE+LVRE+EMYLT T+N++R
Sbjct: 4   TTQLTRHIESYVDSSST--PAQQASSLNAVASLVNTDALPLEALVRELEMYLTTTDNVVR 61

Query: 127 ARGILLLAELLTRISSKPLETTTIHSLIGFFAERLSDWRALR 2
           ARGILLLAE++TRI SKPL + TIHSL+GFF +RL+DWRA++
Sbjct: 62  ARGILLLAEVMTRIESKPLNSATIHSLVGFFKDRLADWRAVQ 103


>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  130 bits (328), Expect = 8e-29
 Identities = 68/101 (67%), Positives = 83/101 (82%)
 Frame = -1

Query: 304 SSCVKHIETYIDSSSSKSPAQQDASLDAIAKLLLNDMITLESLVREMEMYLTITNNIIRA 125
           S   ++IE+Y+DSS  +S  QQ AS+DAIA LL ND++TLE+LV EM MYLT T+NIIR 
Sbjct: 5   SQLTQYIESYVDSS--RSSTQQAASVDAIAYLLKNDILTLETLVTEMGMYLTTTDNIIRT 62

Query: 124 RGILLLAELLTRISSKPLETTTIHSLIGFFAERLSDWRALR 2
           RGILLLAELLTR++SKPL+  TIHSLI FF +RL+DWRALR
Sbjct: 63  RGILLLAELLTRLASKPLDNVTIHSLISFFTDRLADWRALR 103


>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
           communis] gi|223544868|gb|EEF46383.1| DNA
           repair/transcription protein met18/mms19, putative
           [Ricinus communis]
          Length = 1174

 Score =  126 bits (316), Expect = 2e-27
 Identities = 66/97 (68%), Positives = 80/97 (82%)
 Frame = -1

Query: 292 KHIETYIDSSSSKSPAQQDASLDAIAKLLLNDMITLESLVREMEMYLTITNNIIRARGIL 113
           ++IE+Y+D+S S S  QQ ASLDAI  LL ND +T+ SLV+EMEMYLT T++IIRARGIL
Sbjct: 9   QYIESYVDASRSLS--QQAASLDAIVLLLKNDAVTIGSLVKEMEMYLTTTDDIIRARGIL 66

Query: 112 LLAELLTRISSKPLETTTIHSLIGFFAERLSDWRALR 2
           LL E L+ +SSKPL+ TTIHSLI FF ERL+DWRALR
Sbjct: 67  LLGEALSHLSSKPLDNTTIHSLIAFFTERLADWRALR 103


>ref|XP_003597674.1| MMS19 nucleotide excision repair protein-like protein [Medicago
           truncatula] gi|355486722|gb|AES67925.1| MMS19 nucleotide
           excision repair protein-like protein [Medicago
           truncatula]
          Length = 1140

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/102 (58%), Positives = 84/102 (82%)
 Frame = -1

Query: 307 TSSCVKHIETYIDSSSSKSPAQQDASLDAIAKLLLNDMITLESLVREMEMYLTITNNIIR 128
           T+   +HIE+Y+DSSS+  P+ Q ASLDAI  L+  + +TLE+LVRE++MYLT T+ +IR
Sbjct: 4   TTQLTRHIESYVDSSST--PSHQVASLDAIVLLIKTNALTLEALVRELDMYLTSTDTLIR 61

Query: 127 ARGILLLAELLTRISSKPLETTTIHSLIGFFAERLSDWRALR 2
           +RGILLLAE+LTRI+S  L++ TIHSL+GFF ER++DW+A+R
Sbjct: 62  SRGILLLAEVLTRINSISLDSKTIHSLVGFFKERMADWKAVR 103


>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog
           [Cucumis sativus]
          Length = 1147

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/96 (59%), Positives = 79/96 (82%)
 Frame = -1

Query: 289 HIETYIDSSSSKSPAQQDASLDAIAKLLLNDMITLESLVREMEMYLTITNNIIRARGILL 110
           ++E+++D S  ++P+QQ  SL+ I  L+ N+++T+E+LVREM MYLTIT+NIIR RGILL
Sbjct: 10  YVESFVDVS--RTPSQQATSLETITSLVKNNVLTIETLVREMGMYLTITDNIIRGRGILL 67

Query: 109 LAELLTRISSKPLETTTIHSLIGFFAERLSDWRALR 2
           L ELL  ++SKPL++ TIHSLI FF ERL+DW+ALR
Sbjct: 68  LGELLACLASKPLDSATIHSLIAFFTERLADWKALR 103


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