BLASTX nr result

ID: Atractylodes21_contig00032815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032815
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312184.1| chromatin remodeling complex subunit [Populu...    88   6e-16
ref|NP_189853.1| chromatin remodeling 38 [Arabidopsis thaliana] ...    85   7e-15
gb|ABA18099.1| SNF2 domain-containing protein [Olimarabidopsis p...    84   2e-14
ref|XP_002877253.1| hypothetical protein ARALYDRAFT_484766 [Arab...    83   3e-14
ref|XP_004171552.1| PREDICTED: uncharacterized LOC101215377 [Cuc...    82   4e-14

>ref|XP_002312184.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222852004|gb|EEE89551.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1234

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/80 (52%), Positives = 55/80 (68%)
 Frame = +3

Query: 51  MKRKYLNLHQNTHPFDPLPFEAYWCRSWVPVERLRIRNGVISMFIIDKGEATEETIPMSD 230
           MKRK   LHQ+ HPF+  PFEA  C SW  VE ++IR+G +++  +D     EE  P S+
Sbjct: 1   MKRK--RLHQSKHPFNAHPFEALCCGSWQSVELIQIRDGAMTVHFVDSHHRIEEKGPFSN 58

Query: 231 LRIRSRKATLIDCTCFLRPG 290
           +R++SRKAT  DCTCFLRPG
Sbjct: 59  VRVKSRKATSSDCTCFLRPG 78


>ref|NP_189853.1| chromatin remodeling 38 [Arabidopsis thaliana]
           gi|7523392|emb|CAB86450.1| putative protein [Arabidopsis
           thaliana] gi|332644224|gb|AEE77745.1| chromatin
           remodeling 38 [Arabidopsis thaliana]
          Length = 1256

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/80 (51%), Positives = 54/80 (67%)
 Frame = +3

Query: 51  MKRKYLNLHQNTHPFDPLPFEAYWCRSWVPVERLRIRNGVISMFIIDKGEATEETIPMSD 230
           MKRK+    +  HPF+P PFE +   +W  VE LRI NG ++M +++ G+  ++  P   
Sbjct: 1   MKRKHY--FEFNHPFNPCPFEVFCWGTWKAVEYLRIENGTMTMRLLENGQVLDDIKPFQR 58

Query: 231 LRIRSRKATLIDCTCFLRPG 290
           LRIRSRKATLIDCT FLRPG
Sbjct: 59  LRIRSRKATLIDCTSFLRPG 78


>gb|ABA18099.1| SNF2 domain-containing protein [Olimarabidopsis pumila]
          Length = 1256

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/79 (50%), Positives = 53/79 (67%)
 Frame = +3

Query: 51  MKRKYLNLHQNTHPFDPLPFEAYWCRSWVPVERLRIRNGVISMFIIDKGEATEETIPMSD 230
           MKRK  N  +  HPF+P PFE +   +W  VE LRI NG ++M +++ G+  ++  P   
Sbjct: 1   MKRK--NYFEFNHPFNPCPFEVFCLGTWKAVEYLRIENGTMTMRLLENGQVLDDIRPFQR 58

Query: 231 LRIRSRKATLIDCTCFLRP 287
           LR+RSRKATLIDCT FLRP
Sbjct: 59  LRLRSRKATLIDCTSFLRP 77


>ref|XP_002877253.1| hypothetical protein ARALYDRAFT_484766 [Arabidopsis lyrata subsp.
           lyrata] gi|297323091|gb|EFH53512.1| hypothetical protein
           ARALYDRAFT_484766 [Arabidopsis lyrata subsp. lyrata]
          Length = 1254

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/80 (50%), Positives = 53/80 (66%)
 Frame = +3

Query: 51  MKRKYLNLHQNTHPFDPLPFEAYWCRSWVPVERLRIRNGVISMFIIDKGEATEETIPMSD 230
           MKRK+    +  HPF+P PFE +   +W  VE LRI NG ++M +++ G+   +  P   
Sbjct: 1   MKRKHY--FEFNHPFNPCPFEVFCWGTWKAVEYLRIENGTMTMRLLENGQVLADIRPFQR 58

Query: 231 LRIRSRKATLIDCTCFLRPG 290
           LR+RSRKATLIDCT FLRPG
Sbjct: 59  LRLRSRKATLIDCTSFLRPG 78


>ref|XP_004171552.1| PREDICTED: uncharacterized LOC101215377 [Cucumis sativus]
          Length = 1252

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 37/73 (50%), Positives = 51/73 (69%)
 Frame = +3

Query: 72  LHQNTHPFDPLPFEAYWCRSWVPVERLRIRNGVISMFIIDKGEATEETIPMSDLRIRSRK 251
           +++  HPF+  PFEA  C SW  VE++RIRNG+I++ +++      E  P SD R+RSR+
Sbjct: 8   VYEFKHPFNDYPFEAMCCGSWQAVEKIRIRNGLITLHLVNDQFMVLERGPYSDFRVRSRQ 67

Query: 252 ATLIDCTCFLRPG 290
           AT  DCTCFLRPG
Sbjct: 68  ATSSDCTCFLRPG 80


Top