BLASTX nr result

ID: Atractylodes21_contig00032797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032797
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...   339   6e-91
ref|XP_002523130.1| ATP-dependent RNA helicase, putative [Ricinu...   313   3e-83
ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP...   310   4e-82
ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helica...   310   4e-82
emb|CBI36896.3| unnamed protein product [Vitis vinifera]              308   1e-81

>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score =  339 bits (869), Expect = 6e-91
 Identities = 178/259 (68%), Positives = 204/259 (78%), Gaps = 3/259 (1%)
 Frame = +2

Query: 107  TLEPDDGFLDVLGENGNFASLKAAFEALSGKRTFDSKSDSAQDDP-TPGD-SKQSDSNRV 280
            T E D   +D+LGE+ + ASLKAAF+AL+GK   +  S   +  P TPG  S QS+ N  
Sbjct: 716  TSEDDGNLVDILGEDRSLASLKAAFDALAGKTAINHNSKGEEVVPDTPGRCSDQSNPNMG 775

Query: 281  AWRE-TNDVSPGALCVLPLYAMLPASAQLRVFEEIKQGERLIVVATNVAETSLTIPGIKY 457
              R+  ND+S GALCVLPLYAMLPA+AQLRVFEEIK+GERL+VVATNVAETSLTIPGIKY
Sbjct: 776  KKRDGENDLSAGALCVLPLYAMLPAAAQLRVFEEIKEGERLVVVATNVAETSLTIPGIKY 835

Query: 458  VVDTGREKVKNYNSSNGMETYEVQWISKXXXXXXXXXXXXXXPGHCYRLYSSAVFNNIFA 637
            VVDTGREKVKNY+ SNGMETYEVQWISK              PGHCYRLYSSAVFNNI  
Sbjct: 836  VVDTGREKVKNYDHSNGMETYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFNNILP 895

Query: 638  DFSTAEILKIPVDGVVLLMKSMGIKEITKFPFPTPPEAKALFEAELCLKSLQALDTDGRL 817
            DFS AEILK+PV+GV+LLMKSM I ++  FPFPTPP+A AL EAE CLK+L+AL++ GRL
Sbjct: 896  DFSMAEILKVPVEGVILLMKSMDIDKVANFPFPTPPDAIALAEAERCLKALEALNSKGRL 955

Query: 818  TPLGKAMSHYPMSPRHSRM 874
            TPLGKAM+HYPMSPRHSRM
Sbjct: 956  TPLGKAMAHYPMSPRHSRM 974


>ref|XP_002523130.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223537692|gb|EEF39315.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 868

 Score =  313 bits (803), Expect = 3e-83
 Identities = 164/267 (61%), Positives = 196/267 (73%), Gaps = 2/267 (0%)
 Frame = +2

Query: 80  DKVDSGTQDTLEPDDGFLDVLGENGNFASLKAAFEALSGKRTFDSKSDSAQDDPTPGDSK 259
           D VDS  Q   +     LDVLGE G+ +SL+AAFEAL+GK   ++ S+  Q    P +  
Sbjct: 176 DDVDSADQSIHKNGSNVLDVLGEEGSLSSLRAAFEALAGKPESETNSEGKQTPFVPEEWV 235

Query: 260 QSDSNRVAW--RETNDVSPGALCVLPLYAMLPASAQLRVFEEIKQGERLIVVATNVAETS 433
           +  ++ V    R    +S GAL VLPLYAMLPA+AQLR+F+E+K+GERL+VVATNVAETS
Sbjct: 236 EQSNHSVGKNSRGGKGISIGALRVLPLYAMLPAAAQLRIFDEVKEGERLVVVATNVAETS 295

Query: 434 LTIPGIKYVVDTGREKVKNYNSSNGMETYEVQWISKXXXXXXXXXXXXXXPGHCYRLYSS 613
           LTIP IKYVVDTGREKVKNYN SNGMETYE+QWISK              PGHCYRLYSS
Sbjct: 296 LTIPAIKYVVDTGREKVKNYNPSNGMETYEIQWISKASAAQRAGRAGRTGPGHCYRLYSS 355

Query: 614 AVFNNIFADFSTAEILKIPVDGVVLLMKSMGIKEITKFPFPTPPEAKALFEAELCLKSLQ 793
           AVFNNI  DFS AEI K+P++ +VL++KSM +K +  FPFPTPPEA AL EAE CLK L+
Sbjct: 356 AVFNNILPDFSCAEISKVPLENIVLILKSMSVK-VENFPFPTPPEANALKEAEDCLKILE 414

Query: 794 ALDTDGRLTPLGKAMSHYPMSPRHSRM 874
           ALD +GRLT LGKAMS++PM PRHSRM
Sbjct: 415 ALDENGRLTALGKAMSYFPMGPRHSRM 441


>ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
            DHX37-like [Cucumis sativus]
          Length = 1333

 Score =  310 bits (793), Expect = 4e-82
 Identities = 166/257 (64%), Positives = 188/257 (73%), Gaps = 3/257 (1%)
 Frame = +2

Query: 113  EPDDGFLDVLGENGNFASLKAAFEALSGKRTFDSKSDSAQDDPTPGD---SKQSDSNRVA 283
            E D    DV+ ++ + +SLKAAF+AL  K   D   D  Q D T  +   SKQ  S R+ 
Sbjct: 641  ETDGNLTDVVMDDASMSSLKAAFDALDRKNALDL--DKRQVDHTTDEDLSSKQCVSARLK 698

Query: 284  WRETNDVSPGALCVLPLYAMLPASAQLRVFEEIKQGERLIVVATNVAETSLTIPGIKYVV 463
                   S GAL VLPLYAMLPA+AQLRVFEE+K+GERL+VVATNVAETSLTIPGIKYVV
Sbjct: 699  ENVEFGFSVGALHVLPLYAMLPAAAQLRVFEEVKEGERLVVVATNVAETSLTIPGIKYVV 758

Query: 464  DTGREKVKNYNSSNGMETYEVQWISKXXXXXXXXXXXXXXPGHCYRLYSSAVFNNIFADF 643
            DTGREKVK YNSSNG+E YEVQWISK              PGHCYRLYSSAVF+N   DF
Sbjct: 759  DTGREKVKTYNSSNGIENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNTLPDF 818

Query: 644  STAEILKIPVDGVVLLMKSMGIKEITKFPFPTPPEAKALFEAELCLKSLQALDTDGRLTP 823
            S AEI KIPVDGVVLLMKSMGI ++  FPFPTPPE  A+ EAE CLK+L+ALD+ GRLT 
Sbjct: 819  SLAEIAKIPVDGVVLLMKSMGISKVVNFPFPTPPETSAVLEAESCLKALEALDSGGRLTA 878

Query: 824  LGKAMSHYPMSPRHSRM 874
            LGKAM+ YP+SPRHSRM
Sbjct: 879  LGKAMAQYPLSPRHSRM 895


>ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Cucumis
            sativus]
          Length = 1333

 Score =  310 bits (793), Expect = 4e-82
 Identities = 166/257 (64%), Positives = 188/257 (73%), Gaps = 3/257 (1%)
 Frame = +2

Query: 113  EPDDGFLDVLGENGNFASLKAAFEALSGKRTFDSKSDSAQDDPTPGD---SKQSDSNRVA 283
            E D    DV+ ++ + +SLKAAF+AL  K   D   D  Q D T  +   SKQ  S R+ 
Sbjct: 641  ETDGNLTDVVMDDASMSSLKAAFDALDRKNALDL--DKRQVDHTTDEDLSSKQCVSARLK 698

Query: 284  WRETNDVSPGALCVLPLYAMLPASAQLRVFEEIKQGERLIVVATNVAETSLTIPGIKYVV 463
                   S GAL VLPLYAMLPA+AQLRVFEE+K+GERL+VVATNVAETSLTIPGIKYVV
Sbjct: 699  ENVEFGFSVGALHVLPLYAMLPAAAQLRVFEEVKEGERLVVVATNVAETSLTIPGIKYVV 758

Query: 464  DTGREKVKNYNSSNGMETYEVQWISKXXXXXXXXXXXXXXPGHCYRLYSSAVFNNIFADF 643
            DTGREKVK YNSSNG+E YEVQWISK              PGHCYRLYSSAVF+N   DF
Sbjct: 759  DTGREKVKTYNSSNGIENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNTLPDF 818

Query: 644  STAEILKIPVDGVVLLMKSMGIKEITKFPFPTPPEAKALFEAELCLKSLQALDTDGRLTP 823
            S AEI KIPVDGVVLLMKSMGI ++  FPFPTPPE  A+ EAE CLK+L+ALD+ GRLT 
Sbjct: 819  SLAEIAKIPVDGVVLLMKSMGISKVVNFPFPTPPETSAVLEAESCLKALEALDSGGRLTA 878

Query: 824  LGKAMSHYPMSPRHSRM 874
            LGKAM+ YP+SPRHSRM
Sbjct: 879  LGKAMAQYPLSPRHSRM 895


>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score =  308 bits (788), Expect = 1e-81
 Identities = 157/222 (70%), Positives = 175/222 (78%)
 Frame = +2

Query: 209  DSKSDSAQDDPTPGDSKQSDSNRVAWRETNDVSPGALCVLPLYAMLPASAQLRVFEEIKQ 388
            +  SDS+ D  T  D K            ND+S GALCVLPLYAMLPA+AQLRVFEEIK+
Sbjct: 524  EDDSDSSYDSETEKDRK------------NDLSAGALCVLPLYAMLPAAAQLRVFEEIKE 571

Query: 389  GERLIVVATNVAETSLTIPGIKYVVDTGREKVKNYNSSNGMETYEVQWISKXXXXXXXXX 568
            GERL+VVATNVAETSLTIPGIKYVVDTGREKVKNY+ SNGMETYEVQWISK         
Sbjct: 572  GERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYDHSNGMETYEVQWISKASAAQRAGR 631

Query: 569  XXXXXPGHCYRLYSSAVFNNIFADFSTAEILKIPVDGVVLLMKSMGIKEITKFPFPTPPE 748
                 PGHCYRLYSSAVFNNI  DFS AEILK+PV+GV+LLMKSM I ++  FPFPTPP+
Sbjct: 632  AGRTGPGHCYRLYSSAVFNNILPDFSMAEILKVPVEGVILLMKSMDIDKVANFPFPTPPD 691

Query: 749  AKALFEAELCLKSLQALDTDGRLTPLGKAMSHYPMSPRHSRM 874
            A AL EAE CLK+L+AL++ GRLTPLGKAM+HYPMSPRHSRM
Sbjct: 692  AIALAEAERCLKALEALNSKGRLTPLGKAMAHYPMSPRHSRM 733


Top