BLASTX nr result

ID: Atractylodes21_contig00032759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032759
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   172   7e-41
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   169   5e-40
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   160   3e-37
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   157   1e-36
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]   157   2e-36

>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  172 bits (435), Expect = 7e-41
 Identities = 96/250 (38%), Positives = 136/250 (54%), Gaps = 19/250 (7%)
 Frame = +3

Query: 3    ERKHRHLLNVARTLLFQGVIPLNMWPECILTATYLINRTPSSVLHGKSPYELVYGFQPAL 182
            ERKHRH+LNVAR+L+FQ  +PL  W EC+LTA YLINR P+ +L  KSP+E++Y   P+L
Sbjct: 927  ERKHRHILNVARSLMFQSNVPLEFWGECVLTAVYLINRIPTPLLSNKSPFEVLYNRPPSL 986

Query: 183  SHLRNFGCLCYATILNNSDKFGARSEKCVLIGYSNSKKGYKLFSLERKQIFFSRDVKFYE 362
            +HLR FGC CY T ++   KF  R+  CV +GY + KKGYK+  L+ ++I  SRDV F E
Sbjct: 987  THLRVFGCECYVTNVHPKQKFDPRASICVFLGYPHGKKGYKVLDLQTQKISVSRDVFFRE 1046

Query: 363  NMYPFKMTSDSQSDSTKDVSHSNFFNFVDIDTNFSLPNDEASGDTLIEHEGNL---PSDN 533
            N++PF  +S      +  +      +F       SLP    S    + H   +   PS N
Sbjct: 1047 NIFPFHSSSSQSQQHSPSLPLPLPISFDSTPQPISLPRFSPSSTPPLSHHNPVSSPPSSN 1106

Query: 534  HD-------ENLV-----SPAEGSVSGPSSCP----EAVVEETNNDNPIRRTTRSSNLPR 665
             D       E++      SP+  S+S P S P            ++ P+RR+TR    P 
Sbjct: 1107 TDVPEPLSHESVASPLPSSPSPSSLSSPPSVPLVPSNTSAPSPTHEPPLRRSTRHIQPPA 1166

Query: 666  KFNDYVVEGK 695
              +DYV+  +
Sbjct: 1167 WHHDYVMSAQ 1176


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  169 bits (428), Expect = 5e-40
 Identities = 96/226 (42%), Positives = 136/226 (60%), Gaps = 12/226 (5%)
 Frame = +3

Query: 3    ERKHRHLLNVARTLLFQGVIPLNMWPECILTATYLINRTPSSVLHGKSPYELVYGFQPAL 182
            ERKHRH+LNVAR  LFQG +P+  W E ILTAT+LINRTPS+VL GK+PYEL++G +P+ 
Sbjct: 660  ERKHRHILNVARACLFQGNLPVKFWGESILTATHLINRTPSAVLKGKTPYELLFGERPSY 719

Query: 183  SHLRNFGCLCYATIL-NNSDKFGARSEKCVLIGYSNSKKGYKLFSLERKQIFFSRDVKFY 359
              LR+FGCLCYA I   N DKF +RS KCV IGY + KK ++++ LE  +IF SRDV+F+
Sbjct: 720  DMLRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRVYDLETGKIFASRDVRFH 779

Query: 360  ENMYPFKMTSDSQ---SDSTKDVSHSNFFNFVDIDTNFSLPNDEASGDTLIEHEGNL--- 521
            E++YP+   + S       T  + + ++  F+ I T     N ++S  +     G++   
Sbjct: 780  EDIYPYATATQSNVPLPPPTPPMVNDDW--FLPISTQVDSTNVDSSSSSSPAQSGSIDQP 837

Query: 522  -----PSDNHDENLVSPAEGSVSGPSSCPEAVVEETNNDNPIRRTT 644
                  S +   N V    GS+  PSS P   ++ + +D     TT
Sbjct: 838  PRSIDQSPSTSTNPVPEEIGSIV-PSSSPSRSIDRSTSDLSASDTT 882


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  160 bits (404), Expect = 3e-37
 Identities = 94/252 (37%), Positives = 138/252 (54%), Gaps = 24/252 (9%)
 Frame = +3

Query: 3    ERKHRHLLNVARTLLFQGVIPLNMWPECILTATYLINRTPSSVLHGKSPYELVYGFQPAL 182
            ERKHRH+LNVAR LLFQ  +P+  W E ILTA YLINRTPSS+L G++PYE+++G +P  
Sbjct: 687  ERKHRHILNVARALLFQASLPIKFWGESILTAAYLINRTPSSILSGRTPYEVLHGSKPVY 746

Query: 183  SHLRNFGCLCYA-TILNNSDKFGARSEKCVLIGYSNSKKGYKLFSLERKQIFFSRDVKFY 359
            S LR FG  CY   +  + DKFG RS  C+ +GY   KKG+K++ +ER +   SRDV F 
Sbjct: 747  SQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFGKKGWKVYDIERNEFLVSRDVIFR 806

Query: 360  ENMYPFKMTSDS--QSDSTKDVSHSNFFNFVDIDTNFSLPN---------------DEAS 488
            E ++P+   + S   S S   VS  + +    ++   S+ +               D + 
Sbjct: 807  EEVFPYAGVNSSTLASTSLPTVSEDDDWAIPPLEVRGSIDSVETERVVCTTDEVVLDTSV 866

Query: 489  GDTLIEHEGNLPSDNHDENLVSPAEGSVSGPSSCPEA-VVEETNNDNPI-----RRTTRS 650
             D+ I ++  +P D       SP   S SG  + P   +V    +  P+     R++ R+
Sbjct: 867  SDSEIPNQEFVPDDTPPS---SPLSVSPSGSPNTPTTPIVVPVASPIPVSPPKQRKSKRA 923

Query: 651  SNLPRKFNDYVV 686
            ++ P K NDYV+
Sbjct: 924  THPPPKLNDYVL 935


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  157 bits (398), Expect = 1e-36
 Identities = 74/135 (54%), Positives = 95/135 (70%), Gaps = 1/135 (0%)
 Frame = +3

Query: 3    ERKHRHLLNVARTLLFQGVIPLNMWPECILTATYLINRTPSSVLHGKSPYELVYGFQPAL 182
            ERKHRH+LN+AR L FQ  +P+  W ECIL+A YLINRTPS +L GKSPYE++Y   P  
Sbjct: 674  ERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKY 733

Query: 183  SHLRNFGCLCYATILNN-SDKFGARSEKCVLIGYSNSKKGYKLFSLERKQIFFSRDVKFY 359
            SHLR FG LCYA   N+  DKF ARS +CV +GY + +KG++LF LE ++ F SRDV F 
Sbjct: 734  SHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQ 793

Query: 360  ENMYPFKMTSDSQSD 404
            E  +P+   S ++ D
Sbjct: 794  ETEFPYSKMSCNEED 808


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score =  157 bits (396), Expect = 2e-36
 Identities = 88/228 (38%), Positives = 125/228 (54%), Gaps = 1/228 (0%)
 Frame = +3

Query: 3    ERKHRHLLNVARTLLFQGVIPLNMWPECILTATYLINRTPSSVLHGKSPYELVYGFQPAL 182
            ERKH+H+LN+ARTL FQ  +P++ W EC+LTA YLINRTP+ +L GK+PYE+++G +P  
Sbjct: 549  ERKHQHILNIARTLRFQACLPIDFWGECVLTAAYLINRTPTPILDGKTPYEILFGEKPNY 608

Query: 183  SHLRNFGCLCYATILNNS-DKFGARSEKCVLIGYSNSKKGYKLFSLERKQIFFSRDVKFY 359
             HLR FG LCYA   + S DKF  RS +C   GY   KKG+KL  LE K+ F SRDV F+
Sbjct: 609  EHLRVFGSLCYAHKKSRSNDKFDXRSRRCXFXGYPYGKKGWKLXDLETKEQFESRDVIFH 668

Query: 360  ENMYPFKMTSDSQSDSTKDVSHSNFFNFVDIDTNFSLPNDEASGDTLIEHEGNLPSDNHD 539
            E ++PF  +S    +  K  ++ N  ++++ D        E       E E N+  D  +
Sbjct: 669  ETIFPFCQSSKGDKEQ-KFQNNGNIESYIEDDDVIVKKTCER------ESEKNIERDKGE 721

Query: 540  ENLVSPAEGSVSGPSSCPEAVVEETNNDNPIRRTTRSSNLPRKFNDYV 683
            EN+ +                 E+ +    + R  R    PR   DY+
Sbjct: 722  ENMETG----------------EDQSQGEMLGRGHRQHKEPRHLQDYI 753


Top