BLASTX nr result

ID: Atractylodes21_contig00032718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032718
         (830 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26017.3| unnamed protein product [Vitis vinifera]              288   1e-75
ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   288   1e-75
ref|XP_002519331.1| pseudouridylate synthase, putative [Ricinus ...   283   3e-74
ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   279   6e-73
emb|CAN81146.1| hypothetical protein VITISV_020811 [Vitis vinifera]   278   1e-72

>emb|CBI26017.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  288 bits (736), Expect = 1e-75
 Identities = 138/184 (75%), Positives = 153/184 (83%)
 Frame = -3

Query: 552 GWQYQPSTPTLQSTLERALTRVTKLERKDLCLVGASRTDTGVHALGQVAHFVTPFNYQGL 373
           GWQYQ S PT+Q  +E+ALTR TKLER+DL LVGASRTDTGVHA GQVAHF+TPFNY GL
Sbjct: 60  GWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAWGQVAHFLTPFNYDGL 119

Query: 372 QDMHAALNGILPPDIRVREISPAIPEFHARFSVTGKIYRYMIYNDTVMDPFHRLYAYHNL 193
           + +HAALNG+LPPDIRVREISPA+PEFHARFSV  KIY Y IYND VMDPF R Y YH++
Sbjct: 120 ESIHAALNGLLPPDIRVREISPAVPEFHARFSVKSKIYHYKIYNDAVMDPFLRHYVYHSV 179

Query: 192 SKLNTCAMMEATKYFVGKHDFSAFANAQRNDRIVNPVKNIFRVDIIEKGPILQVEVEGSG 13
            KLNT AM EA K+F GKHDFSAF NA  NDR  NPVKNIFR D+ E G +LQ+EVEGSG
Sbjct: 180 YKLNTLAMREAAKHFTGKHDFSAFVNASHNDRSPNPVKNIFRFDVNEMGALLQLEVEGSG 239

Query: 12  FLYR 1
           FLYR
Sbjct: 240 FLYR 243


>ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Vitis vinifera]
          Length = 336

 Score =  288 bits (736), Expect = 1e-75
 Identities = 138/184 (75%), Positives = 153/184 (83%)
 Frame = -3

Query: 552 GWQYQPSTPTLQSTLERALTRVTKLERKDLCLVGASRTDTGVHALGQVAHFVTPFNYQGL 373
           GWQYQ S PT+Q  +E+ALTR TKLER+DL LVGASRTDTGVHA GQVAHF+TPFNY GL
Sbjct: 70  GWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAWGQVAHFLTPFNYDGL 129

Query: 372 QDMHAALNGILPPDIRVREISPAIPEFHARFSVTGKIYRYMIYNDTVMDPFHRLYAYHNL 193
           + +HAALNG+LPPDIRVREISPA+PEFHARFSV  KIY Y IYND VMDPF R Y YH++
Sbjct: 130 ESIHAALNGLLPPDIRVREISPAVPEFHARFSVKSKIYHYKIYNDAVMDPFLRHYVYHSV 189

Query: 192 SKLNTCAMMEATKYFVGKHDFSAFANAQRNDRIVNPVKNIFRVDIIEKGPILQVEVEGSG 13
            KLNT AM EA K+F GKHDFSAF NA  NDR  NPVKNIFR D+ E G +LQ+EVEGSG
Sbjct: 190 YKLNTLAMREAAKHFTGKHDFSAFVNASHNDRSPNPVKNIFRFDVNEMGALLQLEVEGSG 249

Query: 12  FLYR 1
           FLYR
Sbjct: 250 FLYR 253


>ref|XP_002519331.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223541646|gb|EEF43195.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 344

 Score =  283 bits (724), Expect = 3e-74
 Identities = 134/184 (72%), Positives = 152/184 (82%)
 Frame = -3

Query: 552 GWQYQPSTPTLQSTLERALTRVTKLERKDLCLVGASRTDTGVHALGQVAHFVTPFNYQGL 373
           GWQ+Q S PT+Q  LE+AL +VTKL+RKDL LVGASRTDTGVHA GQVAHFVTPFNY  L
Sbjct: 86  GWQFQQSPPTIQCYLEKALIQVTKLDRKDLLLVGASRTDTGVHAFGQVAHFVTPFNYPSL 145

Query: 372 QDMHAALNGILPPDIRVREISPAIPEFHARFSVTGKIYRYMIYNDTVMDPFHRLYAYHNL 193
             +HAALNG+LPPDIRVREISPA+PEFHARFS   K+Y Y IYNDT MDPF R YAYH+ 
Sbjct: 146 DTIHAALNGLLPPDIRVREISPAVPEFHARFSTISKLYHYKIYNDTFMDPFLRHYAYHST 205

Query: 192 SKLNTCAMMEATKYFVGKHDFSAFANAQRNDRIVNPVKNIFRVDIIEKGPILQVEVEGSG 13
            KLN  AM +A KYF+G HDFSAFANA R+DR+ NPVK IFR D+IE G +LQ+EVEG+G
Sbjct: 206 YKLNAAAMRQAAKYFIGSHDFSAFANASRDDRVPNPVKTIFRFDVIEMGALLQLEVEGTG 265

Query: 12  FLYR 1
           FLYR
Sbjct: 266 FLYR 269


>ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max]
          Length = 309

 Score =  279 bits (713), Expect = 6e-73
 Identities = 131/184 (71%), Positives = 150/184 (81%)
 Frame = -3

Query: 552 GWQYQPSTPTLQSTLERALTRVTKLERKDLCLVGASRTDTGVHALGQVAHFVTPFNYQGL 373
           GWQYQ S PT+Q TLE+ALTR TKL+RKD CLVGASRTD GVHA GQVAHF TPFNY  L
Sbjct: 41  GWQYQQSPPTVQCTLEKALTRATKLQRKDFCLVGASRTDAGVHAWGQVAHFFTPFNYDNL 100

Query: 372 QDMHAALNGILPPDIRVREISPAIPEFHARFSVTGKIYRYMIYNDTVMDPFHRLYAYHNL 193
           +++HAALNG+LP DIRVREISPA  EFHARFS   KIY Y IYND +MDPF R +AYH++
Sbjct: 101 EELHAALNGLLPTDIRVREISPASAEFHARFSAISKIYHYKIYNDAIMDPFQRHFAYHSV 160

Query: 192 SKLNTCAMMEATKYFVGKHDFSAFANAQRNDRIVNPVKNIFRVDIIEKGPILQVEVEGSG 13
            KLN+  M EA KYFVGKHDFSAFANA  ND + +PVK++FR D+ E G +LQ+EVEGSG
Sbjct: 161 YKLNSAVMREAAKYFVGKHDFSAFANASNNDGVPDPVKHVFRFDLKEMGALLQIEVEGSG 220

Query: 12  FLYR 1
           FLYR
Sbjct: 221 FLYR 224


>emb|CAN81146.1| hypothetical protein VITISV_020811 [Vitis vinifera]
          Length = 403

 Score =  278 bits (711), Expect = 1e-72
 Identities = 138/197 (70%), Positives = 153/197 (77%), Gaps = 13/197 (6%)
 Frame = -3

Query: 552 GWQYQPSTPTLQSTLERALTRVTKLERKDLCLVGASRTDTGVHALGQVAHFVTPFNYQGL 373
           GWQYQ S PT+Q  +E+ALTR TKLER+DL LVGASRTDTGVHA GQVAHF+TPFNY GL
Sbjct: 124 GWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAWGQVAHFLTPFNYDGL 183

Query: 372 QDMHAALNGILPPDIRVREISPAIPEFHARFSVTGKIYRYMIYNDTVMDPFHRLYAYHNL 193
           + +HAALNG+LPPDIRVREISPA+PEFHARFS   KIY Y IYND VMDPF R Y YH++
Sbjct: 184 ESIHAALNGLLPPDIRVREISPAVPEFHARFSXKSKIYHYKIYNDAVMDPFLRHYVYHSV 243

Query: 192 SKLNTCAMMEATKYFVGKHDFSAFANAQRNDRIVNPVKNIFRVD-------------IIE 52
            KLNT AM EA K+F GKHDFSAF NA  NDR  NPVKNIFR D             II 
Sbjct: 244 YKLNTLAMREAAKHFTGKHDFSAFVNASHNDRSPNPVKNIFRFDVNEMMFLELIVNCIIA 303

Query: 51  KGPILQVEVEGSGFLYR 1
           +G +LQ+EVEGSGFLYR
Sbjct: 304 QGALLQLEVEGSGFLYR 320


Top