BLASTX nr result

ID: Atractylodes21_contig00032581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032581
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316112.1| predicted protein [Populus trichocarpa] gi|2...   149   1e-33
dbj|BAG80685.1| ribosomal protein L32 [Populus alba]                  148   2e-33
gb|ADR71288.1| 50S ribosomal protein L32pA [Hevea brasiliensis]       140   4e-31
ref|XP_002522475.1| conserved hypothetical protein [Ricinus comm...   140   6e-31
ref|XP_002311319.1| predicted protein [Populus trichocarpa] gi|2...   139   1e-30

>ref|XP_002316112.1| predicted protein [Populus trichocarpa]
           gi|224112197|ref|XP_002316116.1| predicted protein
           [Populus trichocarpa] gi|222865152|gb|EEF02283.1|
           predicted protein [Populus trichocarpa]
           gi|222865156|gb|EEF02287.1| predicted protein [Populus
           trichocarpa]
          Length = 138

 Score =  149 bits (375), Expect = 1e-33
 Identities = 76/140 (54%), Positives = 96/140 (68%), Gaps = 4/140 (2%)
 Frame = +3

Query: 327 MALSRMAMARSVACKSKDCCILALTRWNHAIAHPPPLDCAVSRSAVLPPLVLPEFERSID 506
           MAL R+ M +  A ++ + C L + +W H +A  PPLD A+  S   P   LPEF+ + D
Sbjct: 1   MAL-RLGMLKCAA-EANNGCRLGIRKWTHVVAMAPPLDGALESSIASPQFTLPEFDANQD 58

Query: 507 TSNDYIGSGF----YVGSGSMELMAVPKKKTSPHKRGIRNGPKALKPIPVIIRCKVCGRV 674
           TSN+    GF    +   GSMELMAVPK+K +PHKRGIRNGPKALKP PVIIRCK CG+V
Sbjct: 59  TSNNSSDFGFTFPGFSFGGSMELMAVPKRKVTPHKRGIRNGPKALKPTPVIIRCKSCGQV 118

Query: 675 KLPHFFCCSGLRDTDGQNNS 734
           KLPHF+CCSG R  +G+ N+
Sbjct: 119 KLPHFYCCSGDRGKNGKRNN 138


>dbj|BAG80685.1| ribosomal protein L32 [Populus alba]
          Length = 138

 Score =  148 bits (374), Expect = 2e-33
 Identities = 76/139 (54%), Positives = 94/139 (67%), Gaps = 4/139 (2%)
 Frame = +3

Query: 327 MALSRMAMARSVACKSKDCCILALTRWNHAIAHPPPLDCAVSRSAVLPPLVLPEFERSID 506
           MAL R+ M +  A +  + C L + +W H +A  PPLD A+  S   P   LPEF+ + D
Sbjct: 1   MAL-RLGMLKCAA-EGNNGCRLGIRKWTHVVAMAPPLDGALESSIAAPQFTLPEFDANQD 58

Query: 507 TSNDYIGSGF----YVGSGSMELMAVPKKKTSPHKRGIRNGPKALKPIPVIIRCKVCGRV 674
           TS +    GF    +   GSMELMAVPK+K +PHKRGIRNGPKALKPIPVIIRCK CG+V
Sbjct: 59  TSKNSSDFGFTFPGFSFGGSMELMAVPKRKVTPHKRGIRNGPKALKPIPVIIRCKSCGQV 118

Query: 675 KLPHFFCCSGLRDTDGQNN 731
           KLPHF+CCSG R  +G+ N
Sbjct: 119 KLPHFYCCSGDRGKNGERN 137


>gb|ADR71288.1| 50S ribosomal protein L32pA [Hevea brasiliensis]
          Length = 139

 Score =  140 bits (353), Expect = 4e-31
 Identities = 67/123 (54%), Positives = 83/123 (67%), Gaps = 6/123 (4%)
 Frame = +3

Query: 384 CILALTRWNHAIAHPPPLDCAVSRSAVLPPLVLPEFERSIDTSNDYIGSGFYVG------ 545
           C L+L RW H  + P PLD ++ R+   P +VLPEF+ + D  N    +    G      
Sbjct: 17  CTLSLLRWAHIASMPSPLDGSLQRTTAPPDMVLPEFDTNPDNVNSSYRNNLEFGFPSFSF 76

Query: 546 SGSMELMAVPKKKTSPHKRGIRNGPKALKPIPVIIRCKVCGRVKLPHFFCCSGLRDTDGQ 725
            GS+E+MAVPKKK SPHKRGIRNGPKALKP PVIIRC+ CGR+KLPHF+CCSG R   G+
Sbjct: 77  GGSIEVMAVPKKKVSPHKRGIRNGPKALKPTPVIIRCRSCGRIKLPHFYCCSGDRGKAGE 136

Query: 726 NNS 734
            N+
Sbjct: 137 QNN 139


>ref|XP_002522475.1| conserved hypothetical protein [Ricinus communis]
           gi|223538360|gb|EEF39967.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 140

 Score =  140 bits (352), Expect = 6e-31
 Identities = 68/122 (55%), Positives = 80/122 (65%), Gaps = 7/122 (5%)
 Frame = +3

Query: 390 LALTRWNHAIAHPPPLDCAVSRSAVLPPLVLPEFERSIDTSNDYIGSGFYVG-------S 548
           L   RW H  A PPPLD +++ +   P +VLPEF  + D SN    +    G        
Sbjct: 19  LGFLRWTHVAAMPPPLDGSINNAIAPPQMVLPEFNPNHDNSNSSYDNNLEFGFLPSFSFG 78

Query: 549 GSMELMAVPKKKTSPHKRGIRNGPKALKPIPVIIRCKVCGRVKLPHFFCCSGLRDTDGQN 728
           GSM+LMAVPKKK S HKRGIRNGPKALKP PVIIRC+ CGRVKLPHF+CCSG R   G+ 
Sbjct: 79  GSMDLMAVPKKKVSRHKRGIRNGPKALKPTPVIIRCRSCGRVKLPHFYCCSGERGNAGEQ 138

Query: 729 NS 734
           N+
Sbjct: 139 NN 140


>ref|XP_002311319.1| predicted protein [Populus trichocarpa] gi|222851139|gb|EEE88686.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  139 bits (350), Expect = 1e-30
 Identities = 69/121 (57%), Positives = 83/121 (68%), Gaps = 4/121 (3%)
 Frame = +3

Query: 384 CILALTRWNHAIAHPPPLDCAVSRSAVLPPLVLPEFERSIDTSNDYIGSGF----YVGSG 551
           C   + RW H  A   PLD A+      P L LPE + + DTS++   SGF    +   G
Sbjct: 18  CRSGIRRWAHVPAMARPLDGALESYIASPQLTLPELDANQDTSSNSSNSGFGLPGFSFGG 77

Query: 552 SMELMAVPKKKTSPHKRGIRNGPKALKPIPVIIRCKVCGRVKLPHFFCCSGLRDTDGQNN 731
           SMELMAVPK+K +PHKRGIRNGPKALKPIPVIIRCK CG+VKLPHF+CCSG R  +G+ N
Sbjct: 78  SMELMAVPKRKVTPHKRGIRNGPKALKPIPVIIRCKSCGQVKLPHFYCCSGDRGKNGERN 137

Query: 732 S 734
           +
Sbjct: 138 N 138


Top