BLASTX nr result

ID: Atractylodes21_contig00032576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032576
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150397.1| PREDICTED: 40S ribosomal protein S4-like [Cu...   118   4e-25
ref|XP_004150395.1| PREDICTED: 40S ribosomal protein S4-like [Cu...   118   6e-25
dbj|BAM15885.1| putative 40S ribosomal protein S4, partial [Pyru...   117   7e-25
ref|XP_002268192.1| PREDICTED: 40S ribosomal protein S4-like [Vi...   117   1e-24
gb|ACV70143.1| putative 40S ribosomal protein S4 [Jatropha curcas]    117   1e-24

>ref|XP_004150397.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
           gi|449496878|ref|XP_004160251.1| PREDICTED: 40S
           ribosomal protein S4-like [Cucumis sativus]
          Length = 264

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/71 (81%), Positives = 62/71 (87%)
 Frame = -3

Query: 367 GRVGIIKNKEKHKGSVEIIHIQDLAGQEFATRLGYVFTVGKGTKSWVTLPKGRGIKLSII 188
           GRVG+IKN+EKHKGS E IHIQD  G EFATRLG VFTVGKGTK WV+LPKG+GIKLSII
Sbjct: 190 GRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSII 249

Query: 187 EEARKRRAIQA 155
           EEARKR A QA
Sbjct: 250 EEARKRLASQA 260


>ref|XP_004150395.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
           gi|449496881|ref|XP_004160252.1| PREDICTED: 40S
           ribosomal protein S4-like [Cucumis sativus]
          Length = 264

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/71 (80%), Positives = 62/71 (87%)
 Frame = -3

Query: 367 GRVGIIKNKEKHKGSVEIIHIQDLAGQEFATRLGYVFTVGKGTKSWVTLPKGRGIKLSII 188
           GRVG+IKN+EKHKGS E IHIQD  G EFATRLG VFT+GKGTK WV+LPKG+GIKLSII
Sbjct: 190 GRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSII 249

Query: 187 EEARKRRAIQA 155
           EEARKR A QA
Sbjct: 250 EEARKRLASQA 260


>dbj|BAM15885.1| putative 40S ribosomal protein S4, partial [Pyrus pyrifolia var.
           culta]
          Length = 90

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/73 (73%), Positives = 64/73 (87%)
 Frame = -3

Query: 367 GRVGIIKNKEKHKGSVEIIHIQDLAGQEFATRLGYVFTVGKGTKSWVTLPKGRGIKLSII 188
           GRVG+IKN+EKHKGS E IH+QD +G EFATRLG VFT+GKGTK W++LPKG+GIKL+II
Sbjct: 16  GRVGVIKNREKHKGSFETIHVQDASGHEFATRLGNVFTIGKGTKPWISLPKGKGIKLTII 75

Query: 187 EEARKRRAIQANA 149
           EEA+KR A QA A
Sbjct: 76  EEAKKRAAAQATA 88


>ref|XP_002268192.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
          Length = 264

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/73 (75%), Positives = 64/73 (87%)
 Frame = -3

Query: 367 GRVGIIKNKEKHKGSVEIIHIQDLAGQEFATRLGYVFTVGKGTKSWVTLPKGRGIKLSII 188
           GRVG+IK++EKHKG+ E IH+QD  G EFATRLG VFT+GKGTK WVTLPKG+GIKLSII
Sbjct: 190 GRVGVIKSREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVTLPKGKGIKLSII 249

Query: 187 EEARKRRAIQANA 149
           EEA+KR A QA+A
Sbjct: 250 EEAKKRLAAQASA 262


>gb|ACV70143.1| putative 40S ribosomal protein S4 [Jatropha curcas]
          Length = 264

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/74 (75%), Positives = 62/74 (83%)
 Frame = -3

Query: 367 GRVGIIKNKEKHKGSVEIIHIQDLAGQEFATRLGYVFTVGKGTKSWVTLPKGRGIKLSII 188
           GRVG+IKN+EKHKGS E IHIQD  G EFATRLG VFT+GKGTK WV+ PKG+GIKLSII
Sbjct: 190 GRVGVIKNREKHKGSFETIHIQDATGPEFATRLGNVFTIGKGTKPWVSFPKGKGIKLSII 249

Query: 187 EEARKRRAIQANAV 146
           EEARKR+A  A  V
Sbjct: 250 EEARKRQAAAAQTV 263


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