BLASTX nr result

ID: Atractylodes21_contig00032575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032575
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321191.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_004140002.1| PREDICTED: F-box protein SNE-like [Cucumis s...    57   1e-06
ref|XP_002530225.1| F-box protein SNE, putative [Ricinus communi...    56   3e-06
ref|XP_003544480.1| PREDICTED: F-box protein SNE-like [Glycine max]    55   6e-06
ref|XP_003519657.1| PREDICTED: F-box protein SNE-like [Glycine max]    55   6e-06

>ref|XP_002321191.1| predicted protein [Populus trichocarpa] gi|222861964|gb|EEE99506.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 23/33 (69%), Positives = 30/33 (90%)
 Frame = +3

Query: 153 FCINDNLDLLIEVLKRVDGRSLSAAACVCRQWC 251
           FCIND++D+L+E+LKR+DGRSL  +ACVCR WC
Sbjct: 12  FCINDHVDILLEILKRLDGRSLCVSACVCRLWC 44


>ref|XP_004140002.1| PREDICTED: F-box protein SNE-like [Cucumis sativus]
           gi|449532669|ref|XP_004173303.1| PREDICTED: F-box
           protein SNE-like [Cucumis sativus]
          Length = 152

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/33 (72%), Positives = 27/33 (81%)
 Frame = +3

Query: 153 FCINDNLDLLIEVLKRVDGRSLSAAACVCRQWC 251
           F INDNLD+LIE+LKR+DG SL  A CVCR WC
Sbjct: 16  FLINDNLDILIEILKRLDGPSLGVATCVCRLWC 48


>ref|XP_002530225.1| F-box protein SNE, putative [Ricinus communis]
           gi|223530272|gb|EEF32172.1| F-box protein SNE, putative
           [Ricinus communis]
          Length = 155

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = +3

Query: 153 FCINDNLDLLIEVLKRVDGRSLSAAACVCRQWC 251
           F IND++D+L+E+LKR+DGRSL  AACVC  WC
Sbjct: 13  FSINDHVDILVEILKRLDGRSLGVAACVCNLWC 45


>ref|XP_003544480.1| PREDICTED: F-box protein SNE-like [Glycine max]
          Length = 154

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/33 (69%), Positives = 27/33 (81%)
 Frame = +3

Query: 153 FCINDNLDLLIEVLKRVDGRSLSAAACVCRQWC 251
           F INDN+D+L E+LKR+DG SL  AACVCR WC
Sbjct: 17  FFINDNIDILREILKRLDGPSLGVAACVCRLWC 49


>ref|XP_003519657.1| PREDICTED: F-box protein SNE-like [Glycine max]
          Length = 154

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/33 (69%), Positives = 27/33 (81%)
 Frame = +3

Query: 153 FCINDNLDLLIEVLKRVDGRSLSAAACVCRQWC 251
           F INDN+D+L E+LKR+DG SL  AACVCR WC
Sbjct: 17  FFINDNIDILREILKRLDGPSLGVAACVCRLWC 49


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