BLASTX nr result

ID: Atractylodes21_contig00032565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032565
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   101   2e-19
ref|XP_003628573.1| F-box family-1 [Medicago truncatula] gi|3555...   100   4e-19
ref|NP_973538.1| FBD-associated F-box protein [Arabidopsis thali...    97   5e-18
gb|ABE65865.1| F-box family protein [Arabidopsis thaliana]             97   5e-18
gb|AAO37193.1| hypothetical protein [Arabidopsis thaliana]             97   5e-18

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  101 bits (252), Expect = 2e-19
 Identities = 80/209 (38%), Positives = 103/209 (49%), Gaps = 8/209 (3%)
 Frame = -3

Query: 605 DIISRLPAVLLIHILSLLPEADANRTRILSNTWKNLWMFLPKLRF-------VMPFCWSI 447
           DIIS LP  LL HILS LP   A  T ILS  W+ LW  +P L F               
Sbjct: 10  DIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVELE 69

Query: 446 EDIKKFHDAVDQALAFRGGMDIERFSL-YCSKNCDYNRVYDWVCTVVKCKVRELELRFPA 270
           E I  F + VD  L       I++F L Y   N D   VY W+C  ++ +V+EL+L    
Sbjct: 70  ERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLD--SVYSWICIALERRVQELDLHLLI 127

Query: 269 DRFRVCFCWDLFRSCNTLVGLTFRGEFVLDVPKDELLFPCLKKMDLVSIVYASEQSFMNL 90
           D +RV     +F  C TLV +       LD+P    L P LK + L S+ Y+ + S   L
Sbjct: 128 D-WRVELP-PMFFICKTLVVVKLSCALFLDIPTTVWL-PSLKALHLKSVEYSDDDSIQKL 184

Query: 89  ISGCPVLEELFVERQLICQSDNLQTFKVS 3
           +SGCPVLEEL +ER+   + DN     VS
Sbjct: 185 LSGCPVLEELVIERE---ERDNQWVVNVS 210


>ref|XP_003628573.1| F-box family-1 [Medicago truncatula] gi|355522595|gb|AET03049.1|
           F-box family-1 [Medicago truncatula]
          Length = 524

 Score =  100 bits (249), Expect = 4e-19
 Identities = 71/212 (33%), Positives = 104/212 (49%), Gaps = 9/212 (4%)
 Frame = -3

Query: 668 IQSKRQRLSSARSDEIRDGGEDIISRLPAVLLIHILSLLPEADANRT-RILSNTWKNLWM 492
           I  +RQ+   A +     GG D +S LP  +L HILS LP   +  T  ++S  W+NLW 
Sbjct: 6   ISKRRQKACLAAAT----GGTDRLSGLPDSILCHILSFLPTRTSVATMNLVSRRWRNLWK 61

Query: 491 FLPKLRFVMPFCWSIEDIKKFHDAVDQALAFRGGMDIERFSLYCSKNCDY------NRVY 330
                 F         D ++F   V+  LA R   DI++F L  + +C +      N V 
Sbjct: 62  HAQVFDFDFDCDGVSADYERFRFFVNSVLALRKSRDIQKFHLTITSDCQFMSDIQNNYVE 121

Query: 329 DWVCTVVKCKVRELELRFP--ADRFRVCFCWDLFRSCNTLVGLTFRGEFVLDVPKDELLF 156
            W+C      ++EL L  P  AD+  V     LF +C+ LV L+  G F ++V    + F
Sbjct: 122 MWICAATGPHLQELSLIIPSYADQI-VKLSPSLFMNCSNLVSLSLDGAFEVEVKHSSVYF 180

Query: 155 PCLKKMDLVSIVYASEQSFMNLISGCPVLEEL 60
           P LK++ L  ++  SE SF   +SGCP+LE L
Sbjct: 181 PSLKRLRLGELIVDSEVSF---LSGCPMLETL 209


>ref|NP_973538.1| FBD-associated F-box protein [Arabidopsis thaliana]
           gi|330252806|gb|AEC07900.1| FBD-associated F-box protein
           [Arabidopsis thaliana]
          Length = 355

 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 7/207 (3%)
 Frame = -3

Query: 605 DIISRLPAVLLIHILSLLPEADANRTRILSNTWKNLWMFLPKLRFVMPFCWSIEDIKKFH 426
           D IS LP  LL+ IL  LP  +   T ILS  W+ LW+++PKL FVM    S   I+ F 
Sbjct: 2   DRISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTFVMNHYESDLPIQDF- 60

Query: 425 DAVDQALAFRGGMDIERFSLYC-SKNCDYNRVYDWVCTVVKCKVRELELRFPADRF--RV 255
             + + L       IE F L C S +     +  WV T +  +VREL + +    +  + 
Sbjct: 61  --ITKNLRLLKPQVIESFHLQCFSSSFKPEDIKHWVVTTISRRVRELIINYCDLSWLDKP 118

Query: 254 CFCWDLFRS---CNTLVGLTFRGE-FVLDVPKDELLFPCLKKMDLVSIVYASEQSFMNLI 87
               DL  S   C +LV L   G   ++DVP+   L PCLK ++L S+ Y++E+S   L+
Sbjct: 119 VVLLDLPNSLYTCTSLVTLKLIGHSIIVDVPRTVSL-PCLKTLELDSVAYSNEESLRLLL 177

Query: 86  SGCPVLEELFVERQLICQSDNLQTFKV 6
           S CPVLE+L + R +    DN++T  +
Sbjct: 178 SYCPVLEDLTIHRDM---HDNVKTLVI 201


>gb|ABE65865.1| F-box family protein [Arabidopsis thaliana]
          Length = 403

 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 7/207 (3%)
 Frame = -3

Query: 605 DIISRLPAVLLIHILSLLPEADANRTRILSNTWKNLWMFLPKLRFVMPFCWSIEDIKKFH 426
           D IS LP  LL+ IL  LP  +   T ILS  W+ LW+++PKL FVM    S   I+ F 
Sbjct: 2   DRISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTFVMNHYESDLPIQDF- 60

Query: 425 DAVDQALAFRGGMDIERFSLYC-SKNCDYNRVYDWVCTVVKCKVRELELRFPADRF--RV 255
             + + L       IE F L C S +     +  WV T +  +VREL + +    +  + 
Sbjct: 61  --ITKNLRLLKPQVIESFHLQCFSSSFKPEDIKHWVVTTISRRVRELIINYCDLSWLDKP 118

Query: 254 CFCWDLFRS---CNTLVGLTFRGE-FVLDVPKDELLFPCLKKMDLVSIVYASEQSFMNLI 87
               DL  S   C +LV L   G   ++DVP+   L PCLK ++L S+ Y++E+S   L+
Sbjct: 119 VVLLDLPNSLYTCTSLVTLKLIGHSIIVDVPRTVSL-PCLKTLELDSVAYSNEESLRLLL 177

Query: 86  SGCPVLEELFVERQLICQSDNLQTFKV 6
           S CPVLE+L + R +    DN++T  +
Sbjct: 178 SYCPVLEDLTIHRDM---HDNVKTLVI 201


>gb|AAO37193.1| hypothetical protein [Arabidopsis thaliana]
          Length = 355

 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 7/207 (3%)
 Frame = -3

Query: 605 DIISRLPAVLLIHILSLLPEADANRTRILSNTWKNLWMFLPKLRFVMPFCWSIEDIKKFH 426
           D IS LP  LL+ IL  LP  +   T ILS  W+ LW+++PKL FVM    S   I+ F 
Sbjct: 2   DRISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTFVMNHYESDLPIQDF- 60

Query: 425 DAVDQALAFRGGMDIERFSLYC-SKNCDYNRVYDWVCTVVKCKVRELELRFPADRF--RV 255
             + + L       IE F L C S +     +  WV T +  +VREL + +    +  + 
Sbjct: 61  --ITKNLRLLKPQVIESFHLQCFSSSFKPEDIKHWVVTTISRRVRELIINYCDLSWLDKP 118

Query: 254 CFCWDLFRS---CNTLVGLTFRGE-FVLDVPKDELLFPCLKKMDLVSIVYASEQSFMNLI 87
               DL  S   C +LV L   G   ++DVP+   L PCLK ++L S+ Y++E+S   L+
Sbjct: 119 VVLLDLPNSLYTCTSLVTLKLIGHSIIVDVPRTVSL-PCLKTLELDSVAYSNEESLRLLL 177

Query: 86  SGCPVLEELFVERQLICQSDNLQTFKV 6
           S CPVLE+L + R +    DN++T  +
Sbjct: 178 SYCPVLEDLTIHRDM---HDNVKTLVI 201


Top