BLASTX nr result

ID: Atractylodes21_contig00032556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032556
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    66   3e-09
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    65   6e-09
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    64   1e-08
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    61   1e-07
gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncat...    59   3e-07

>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
 Frame = -2

Query: 248 RGFRSLSRFEWEERRRKGLCYRCGQTFGPA-HKCPEGDLRVILLADDEYVSDEGDILLM- 75
           +G RS+   E  ERR KGLC++CG  + P  HKCPE  LRV++L + E ++DEG+I+ M 
Sbjct: 297 KGVRSIRNNEMAERRAKGLCFKCGGKYHPTLHKCPERALRVLILGEGEALNDEGEIMAME 356

Query: 74  ----DSEPQIQ 54
               DSE +I+
Sbjct: 357 AVQPDSEEEIE 367


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = -2

Query: 254  RNRGFRSLSRFEWEERRRKGLCYRCGQTFGPA-HKCPEGDLRVILLADDEYVSDEGDILL 78
            R +G RS+   E  ERR KGLC++CG  + P  HKCPE  LRV++L + E V++EG+I+ 
Sbjct: 920  RWKGVRSIQNGEMAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEIVS 979

Query: 77   MDSEPQIQ 54
            ++++  ++
Sbjct: 980  LETQEVLE 987


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/73 (42%), Positives = 47/73 (64%)
 Frame = -2

Query: 263 SQSRNRGFRSLSRFEWEERRRKGLCYRCGQTFGPAHKCPEGDLRVILLADDEYVSDEGDI 84
           S  R+R F  LS  E  ER++KGLC++CG  F P H+CP+  LRV++L +DE    EG +
Sbjct: 89  SGPRDRSFTHLSYNELMERKQKGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEPEGKL 148

Query: 83  LLMDSEPQIQPGD 45
           L ++ + + + GD
Sbjct: 149 LAVEVDDE-EEGD 160


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 6/73 (8%)
 Frame = -2

Query: 254 RNRGFRSLSRFEWEERRRKGLCYRCGQTFGPA-HKCPEGDLRVILLADDEYVSDEGDILL 78
           R +G RS+   E+EERR KGLC++CG  + P  HKC E  LRV++L + E ++ EG+I+ 
Sbjct: 311 RWKGIRSIHNEEFEERRAKGLCFKCGGKYHPTFHKCLERALRVLILGEGETMTKEGEIVS 370

Query: 77  M-----DSEPQIQ 54
           M     +SE +++
Sbjct: 371 MKDVTVESEEEVE 383


>gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/63 (41%), Positives = 43/63 (68%)
 Frame = -2

Query: 254 RNRGFRSLSRFEWEERRRKGLCYRCGQTFGPAHKCPEGDLRVILLADDEYVSDEGDILLM 75
           R++  RSLS  E  +RR+KGLC++CG  + P H+CP+ +L V++L DD    DE ++ ++
Sbjct: 43  RDKNVRSLSSQEIADRRQKGLCFKCGGPYHPRHQCPDKNLSVMVLEDDS--EDENEVRVL 100

Query: 74  DSE 66
           + E
Sbjct: 101 NDE 103


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