BLASTX nr result

ID: Atractylodes21_contig00032437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032437
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540759.1| PREDICTED: putative cyclic nucleotide-gated ...    65   8e-09
ref|NP_180393.1| cyclic nucleotide-gated channel 15 [Arabidopsis...    62   4e-08
ref|XP_003606366.1| CNGC5-like protein [Medicago truncatula] gi|...    62   4e-08
ref|XP_002880939.1| ATCNGC15 [Arabidopsis lyrata subsp. lyrata] ...    62   4e-08
ref|XP_003590482.1| CNGC5-like protein [Medicago truncatula] gi|...    62   4e-08

>ref|XP_003540759.1| PREDICTED: putative cyclic nucleotide-gated ion channel 15-like
           [Glycine max]
          Length = 692

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = -1

Query: 211 VKSYICAELVRRIPLFDQMDERTVDAICERLKPMICIPRT 92
           +K ++C ELVRR+PLFDQMDER +DAICERLKP +C   T
Sbjct: 463 IKRHLCLELVRRVPLFDQMDERMLDAICERLKPALCTENT 502


>ref|NP_180393.1| cyclic nucleotide-gated channel 15 [Arabidopsis thaliana]
           gi|38503241|sp|Q9SL29.1|CNG15_ARATH RecName:
           Full=Putative cyclic nucleotide-gated ion channel 15;
           AltName: Full=Cyclic nucleotide- and
           calmodulin-regulated ion channel 15
           gi|4803955|gb|AAD29827.1| putative cyclic nucleotide and
           calmodulin-regulated ion channel protein [Arabidopsis
           thaliana] gi|330253003|gb|AEC08097.1| cyclic
           nucleotide-gated channel 15 [Arabidopsis thaliana]
          Length = 678

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = -1

Query: 211 VKSYICAELVRRIPLFDQMDERTVDAICERLKPMICIPRT 92
           +K ++C +LVRR+PLFDQMDER +DAICERLKP +C   T
Sbjct: 457 IKRHLCFDLVRRVPLFDQMDERMLDAICERLKPALCTEGT 496


>ref|XP_003606366.1| CNGC5-like protein [Medicago truncatula]
           gi|355507421|gb|AES88563.1| CNGC5-like protein [Medicago
           truncatula]
          Length = 685

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = -1

Query: 211 VKSYICAELVRRIPLFDQMDERTVDAICERLKPMICIPRT 92
           +K ++C ELVRR+PLFD MDER +DAICERLKP +C   T
Sbjct: 448 IKRHLCLELVRRVPLFDAMDERMLDAICERLKPALCTENT 487


>ref|XP_002880939.1| ATCNGC15 [Arabidopsis lyrata subsp. lyrata]
           gi|297326778|gb|EFH57198.1| ATCNGC15 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 678

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = -1

Query: 211 VKSYICAELVRRIPLFDQMDERTVDAICERLKPMICIPRT 92
           +K ++C +LVRR+PLFDQMDER +DAICERLKP +C   T
Sbjct: 457 IKRHLCFDLVRRVPLFDQMDERMLDAICERLKPALCTEGT 496


>ref|XP_003590482.1| CNGC5-like protein [Medicago truncatula]
           gi|355479530|gb|AES60733.1| CNGC5-like protein [Medicago
           truncatula]
          Length = 710

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 25/40 (62%), Positives = 33/40 (82%)
 Frame = -1

Query: 211 VKSYICAELVRRIPLFDQMDERTVDAICERLKPMICIPRT 92
           +K ++C  LVR++PLFDQMD+R +DAICERLKP +C P T
Sbjct: 460 IKRHLCLNLVRQVPLFDQMDDRMLDAICERLKPTLCTPGT 499


Top