BLASTX nr result

ID: Atractylodes21_contig00032341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032341
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF24529.1|AC007534_10 F7F22.15 [Arabidopsis thaliana]             153   2e-35
dbj|BAB10790.1| retroelement pol polyprotein-like [Arabidopsis t...   150   8e-35
ref|XP_003566116.1| PREDICTED: uncharacterized protein LOC100833...   147   7e-34
gb|AAF63114.1|AC006423_15 Hypothetical protein [Arabidopsis thal...   147   9e-34
ref|XP_003561474.1| PREDICTED: uncharacterized protein LOC100839...   146   1e-33

>gb|AAF24529.1|AC007534_10 F7F22.15 [Arabidopsis thaliana]
          Length = 1862

 Score =  153 bits (386), Expect = 2e-35
 Identities = 67/119 (56%), Positives = 82/119 (68%)
 Frame = -1

Query: 357  LNSYQKKRFFRDVRHYFWDDPFLYRSCTDSIIRRCIPEGETASILAHCHELPVXXXXXXX 178
            L SY++K+FFRD+ HY+WD+P+LY  C D I RRC+ E E   IL HCH           
Sbjct: 1452 LTSYERKKFFRDIHHYYWDEPYLYTLCKDKIYRRCVSEDEVEGILLHCHGSAYGGHFATF 1511

Query: 177  XXXXKVLQSGFYWPLIFKDSDAFVKHCDRCQRTGNISRRHEMPLNYILEVELFDVWGID 1
                K+LQ+GF+WP +FKD+  FV  CD CQR GNISRR+EMP N ILEVE+FDVWGID
Sbjct: 1512 KTVSKILQAGFWWPTMFKDAQEFVSKCDSCQRKGNISRRNEMPQNPILEVEIFDVWGID 1570


>dbj|BAB10790.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1864

 Score =  150 bits (380), Expect = 8e-35
 Identities = 65/119 (54%), Positives = 83/119 (69%)
 Frame = -1

Query: 357  LNSYQKKRFFRDVRHYFWDDPFLYRSCTDSIIRRCIPEGETASILAHCHELPVXXXXXXX 178
            L+SY+KK+FF+D+ H++WD+P+LY  C D I RRC+ E E   IL HCH           
Sbjct: 1454 LSSYEKKKFFKDINHFYWDEPYLYTLCKDKIYRRCVSEDEIEGILLHCHGSAYGGHFATF 1513

Query: 177  XXXXKVLQSGFYWPLIFKDSDAFVKHCDRCQRTGNISRRHEMPLNYILEVELFDVWGID 1
                K+LQ+GF+WP +FKD+  F+  CD CQR GNISRR+EMP N ILEVE+FDVWGID
Sbjct: 1514 KTVSKILQAGFWWPSMFKDAQEFISKCDSCQRRGNISRRNEMPQNPILEVEIFDVWGID 1572


>ref|XP_003566116.1| PREDICTED: uncharacterized protein LOC100833674 [Brachypodium
            distachyon]
          Length = 1225

 Score =  147 bits (372), Expect = 7e-34
 Identities = 65/119 (54%), Positives = 83/119 (69%)
 Frame = -1

Query: 357  LNSYQKKRFFRDVRHYFWDDPFLYRSCTDSIIRRCIPEGETASILAHCHELPVXXXXXXX 178
            L   QKK+F  +V++Y+WD+PFLYRSC+D IIRRCIP+ E  S++ HCH           
Sbjct: 806  LTYQQKKKFLHNVKYYYWDEPFLYRSCSDGIIRRCIPQEEAYSVMYHCHASTYGGHASAM 865

Query: 177  XXXXKVLQSGFYWPLIFKDSDAFVKHCDRCQRTGNISRRHEMPLNYILEVELFDVWGID 1
                K+ Q+GFYWP +FKD   F++ CD CQR+G ISRR+EMP   ILEVELFDVWG+D
Sbjct: 866  KTQAKIFQAGFYWPSLFKDVHKFIQACDPCQRSGKISRRNEMPQKGILEVELFDVWGVD 924


>gb|AAF63114.1|AC006423_15 Hypothetical protein [Arabidopsis thaliana]
          Length = 640

 Score =  147 bits (371), Expect = 9e-34
 Identities = 66/119 (55%), Positives = 81/119 (68%)
 Frame = -1

Query: 357 LNSYQKKRFFRDVRHYFWDDPFLYRSCTDSIIRRCIPEGETASILAHCHELPVXXXXXXX 178
           L+SYQKK+FFRD+ HY+WD+P LY+   D + RRCI E E   +L  CH  P        
Sbjct: 449 LSSYQKKKFFRDINHYYWDEPVLYKKGVDGLFRRCIAEEEVQGVLELCHNSPYGGHFATF 508

Query: 177 XXXXKVLQSGFYWPLIFKDSDAFVKHCDRCQRTGNISRRHEMPLNYILEVELFDVWGID 1
               KVLQ+G +WP +FKD+   +  CDRCQR GNISRR+EMP N ILEVE+FDVWGID
Sbjct: 509 KTVQKVLQAGLWWPSMFKDAHEHITRCDRCQRVGNISRRNEMPQNPILEVEVFDVWGID 567


>ref|XP_003561474.1| PREDICTED: uncharacterized protein LOC100839475 [Brachypodium
            distachyon]
          Length = 1354

 Score =  146 bits (369), Expect = 1e-33
 Identities = 64/118 (54%), Positives = 82/118 (69%)
 Frame = -1

Query: 357  LNSYQKKRFFRDVRHYFWDDPFLYRSCTDSIIRRCIPEGETASILAHCHELPVXXXXXXX 178
            L+S+QKKRF  DV+ +FWDDP LY+ C D IIRRCIPE E  S++ HCH  P        
Sbjct: 933  LSSHQKKRFLHDVKEFFWDDPCLYKQCGDGIIRRCIPEEEVQSVICHCHSSPTGGHAASS 992

Query: 177  XXXXKVLQSGFYWPLIFKDSDAFVKHCDRCQRTGNISRRHEMPLNYILEVELFDVWGI 4
                K+LQSGF+WP +F+D   +++ CD CQR+G +SRR++MP   I EVELFDVWGI
Sbjct: 993  KTCAKILQSGFFWPSMFRDVQKYIQSCDPCQRSGKMSRRNKMPQQGIREVELFDVWGI 1050


Top