BLASTX nr result

ID: Atractylodes21_contig00032233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032233
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273724.1| PREDICTED: uncharacterized protein LOC100243...   126   2e-27
ref|XP_003594689.1| 30S ribosomal protein S6 [Medicago truncatul...   123   2e-26
ref|XP_003534806.1| PREDICTED: uncharacterized protein LOC100812...   121   6e-26
gb|ACU18473.1| unknown [Glycine max]                                  121   6e-26
gb|AFK48589.1| unknown [Lotus japonicus]                              121   7e-26

>ref|XP_002273724.1| PREDICTED: uncharacterized protein LOC100243195 [Vitis vinifera]
           gi|296083213|emb|CBI22849.3| unnamed protein product
           [Vitis vinifera]
          Length = 301

 Score =  126 bits (316), Expect = 2e-27
 Identities = 68/113 (60%), Positives = 77/113 (68%)
 Frame = -1

Query: 341 RKSVVMAAXXXXXXXXXKEDRHSFVAKPDETTGIFPEAVLLKQKVVQEDGKLLPEFADDE 162
           RKSVV  A           D H+FV KPDE TG+FPEAVLLK+K  QEDG  LPEFAD E
Sbjct: 50  RKSVVAEAKKRKKDSV---DAHNFVPKPDEATGVFPEAVLLKEKKAQEDGSFLPEFADAE 106

Query: 161 EQELYEALNLMLESDLDVEQSRHYEVVYLIHXXXXXXXXXXNLKIQEFLTEKK 3
           E+ELYE LNL LESDL+VE+ RHYEVVYLIH          N K+Q+F+ EKK
Sbjct: 107 EEELYEFLNLQLESDLNVERMRHYEVVYLIHEKHDEEVENVNSKVQDFIREKK 159


>ref|XP_003594689.1| 30S ribosomal protein S6 [Medicago truncatula]
           gi|124361112|gb|ABN09084.1| Ribosomal protein S6
           [Medicago truncatula] gi|355483737|gb|AES64940.1| 30S
           ribosomal protein S6 [Medicago truncatula]
          Length = 294

 Score =  123 bits (308), Expect = 2e-26
 Identities = 72/137 (52%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
 Frame = -1

Query: 410 NSHLRNGFTLSFPFSSQNLPY-SFRKSVVMAAXXXXXXXXXKEDRHSFVAKPDETTGIFP 234
           N HL +  + S  FS QN P  SF  S++M A          ED HSFV K  E TG FP
Sbjct: 35  NHHLSSSSSFSRQFSLQNNPRKSF--SLIMNARKKDKK----EDTHSFVPKSYEATGFFP 88

Query: 233 EAVLLKQKVVQEDGKLLPEFADDEEQELYEALNLMLESDLDVEQSRHYEVVYLIHXXXXX 54
           E+VLLK+K V+EDGKLLPEF DD+E++LYE+L L +E+D+DVE  RHYE+VYLIH     
Sbjct: 89  ESVLLKKKTVEEDGKLLPEFEDDDERKLYESLKLDVETDMDVELLRHYEIVYLIHEKHAE 148

Query: 53  XXXXXNLKIQEFLTEKK 3
                N K+Q+FL EKK
Sbjct: 149 EVVAVNEKVQDFLREKK 165


>ref|XP_003534806.1| PREDICTED: uncharacterized protein LOC100812111 [Glycine max]
          Length = 333

 Score =  121 bits (304), Expect = 6e-26
 Identities = 74/141 (52%), Positives = 88/141 (62%), Gaps = 3/141 (2%)
 Frame = -1

Query: 416 NLNSHL--RNGF-TLSFPFSSQNLPYSFRKSVVMAAXXXXXXXXXKEDRHSFVAKPDETT 246
           N NS L   NG+ + S P S QN P      VV A           ED HS V KPDE T
Sbjct: 37  NYNSCLIFANGYPSSSLPLSLQNKPRKSASVVVSARRKDKK-----EDTHSSVPKPDEVT 91

Query: 245 GIFPEAVLLKQKVVQEDGKLLPEFADDEEQELYEALNLMLESDLDVEQSRHYEVVYLIHX 66
           G FPEAVLLK++ V+E+GKLLPEF D +E+EL+EAL L L+SD+DV+  RHYEV+YLIH 
Sbjct: 92  GFFPEAVLLKKRTVEEEGKLLPEFEDADERELFEALMLELDSDMDVDILRHYEVMYLIHE 151

Query: 65  XXXXXXXXXNLKIQEFLTEKK 3
                    N KIQ+FL EKK
Sbjct: 152 KHEEEVVAVNEKIQDFLREKK 172


>gb|ACU18473.1| unknown [Glycine max]
          Length = 228

 Score =  121 bits (304), Expect = 6e-26
 Identities = 74/141 (52%), Positives = 88/141 (62%), Gaps = 3/141 (2%)
 Frame = -1

Query: 416 NLNSHL--RNGF-TLSFPFSSQNLPYSFRKSVVMAAXXXXXXXXXKEDRHSFVAKPDETT 246
           N NS L   NG+ + S P S QN P      VV A           ED HS V KPDE T
Sbjct: 37  NYNSCLIFANGYPSSSLPLSLQNKPRKSASVVVSARRKDKK-----EDTHSSVPKPDEVT 91

Query: 245 GIFPEAVLLKQKVVQEDGKLLPEFADDEEQELYEALNLMLESDLDVEQSRHYEVVYLIHX 66
           G FPEAVLLK++ V+E+GKLLPEF D +E+EL+EAL L L+SD+DV+  RHYEV+YLIH 
Sbjct: 92  GFFPEAVLLKKRTVEEEGKLLPEFEDADERELFEALMLELDSDMDVDILRHYEVMYLIHE 151

Query: 65  XXXXXXXXXNLKIQEFLTEKK 3
                    N KIQ+FL EKK
Sbjct: 152 KHEEEVVAVNEKIQDFLREKK 172


>gb|AFK48589.1| unknown [Lotus japonicus]
          Length = 307

 Score =  121 bits (303), Expect = 7e-26
 Identities = 66/126 (52%), Positives = 85/126 (67%)
 Frame = -1

Query: 380 SFPFSSQNLPYSFRKSVVMAAXXXXXXXXXKEDRHSFVAKPDETTGIFPEAVLLKQKVVQ 201
           S PFS+Q+ P      +V A           ED HSFV+KPDE+ G+FPEAVLLK+K+V+
Sbjct: 46  SRPFSAQSKPRKPFSVIVNAQKKDKK-----EDHHSFVSKPDESAGLFPEAVLLKKKIVE 100

Query: 200 EDGKLLPEFADDEEQELYEALNLMLESDLDVEQSRHYEVVYLIHXXXXXXXXXXNLKIQE 21
           EDG+ LPEF D EE++L+E+L L ++SDL+VE  RHYE+VYLIH          N KIQ+
Sbjct: 101 EDGEFLPEFEDAEERKLFESLMLEMDSDLNVELLRHYEIVYLIHEKHEEEVAAVNEKIQD 160

Query: 20  FLTEKK 3
           FL EKK
Sbjct: 161 FLREKK 166


Top