BLASTX nr result

ID: Atractylodes21_contig00032225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032225
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16226.3| unnamed protein product [Vitis vinifera]              121   7e-26
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   121   7e-26
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   117   1e-24
ref|XP_002300065.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela...   113   2e-23

>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/73 (82%), Positives = 65/73 (89%)
 Frame = +3

Query: 3    FNLLVEGTGLQAVMGMEGINGLETTSNHILEVQSTLGIEAARRSIIKEIQYTMESHGMSI 182
            +NLLVEGTGLQ VMG EG+ G ETTSNHI+EVQ TLGIEAAR+ II EIQYTM SHGMSI
Sbjct: 1661 YNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSI 1720

Query: 183  DIRHMMLLADVMT 221
            DIRHMMLLAD+MT
Sbjct: 1721 DIRHMMLLADLMT 1733


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/73 (82%), Positives = 65/73 (89%)
 Frame = +3

Query: 3    FNLLVEGTGLQAVMGMEGINGLETTSNHILEVQSTLGIEAARRSIIKEIQYTMESHGMSI 182
            +NLLVEGTGLQ VMG EG+ G ETTSNHI+EVQ TLGIEAAR+ II EIQYTM SHGMSI
Sbjct: 1225 YNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSI 1284

Query: 183  DIRHMMLLADVMT 221
            DIRHMMLLAD+MT
Sbjct: 1285 DIRHMMLLADLMT 1297


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/73 (78%), Positives = 65/73 (89%)
 Frame = +3

Query: 3    FNLLVEGTGLQAVMGMEGINGLETTSNHILEVQSTLGIEAARRSIIKEIQYTMESHGMSI 182
            F+LLVEGTGLQAVMG EG++G  T SNHI+EVQ  LGIEAAR+ II+EI+YTMESHGMSI
Sbjct: 1242 FSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSI 1301

Query: 183  DIRHMMLLADVMT 221
            DIRHMMLL D+MT
Sbjct: 1302 DIRHMMLLGDLMT 1314


>ref|XP_002300065.1| predicted protein [Populus trichocarpa] gi|222847323|gb|EEE84870.1|
            predicted protein [Populus trichocarpa]
          Length = 1394

 Score =  113 bits (283), Expect = 1e-23
 Identities = 56/73 (76%), Positives = 64/73 (87%)
 Frame = +3

Query: 3    FNLLVEGTGLQAVMGMEGINGLETTSNHILEVQSTLGIEAARRSIIKEIQYTMESHGMSI 182
            +N+ VEG GLQAVMG EG++G +T SNHI+EVQ TLGIEAAR+ II EI+ TMESHGMSI
Sbjct: 1252 YNMFVEGMGLQAVMGTEGVDGRKTKSNHIIEVQETLGIEAARKCIIDEIKGTMESHGMSI 1311

Query: 183  DIRHMMLLADVMT 221
            DIRHMMLLADVMT
Sbjct: 1312 DIRHMMLLADVMT 1324


>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
            gi|300158014|gb|EFJ24638.1| hypothetical protein
            SELMODRAFT_442419 [Selaginella moellendorffii]
          Length = 1348

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/73 (78%), Positives = 61/73 (83%)
 Frame = +3

Query: 3    FNLLVEGTGLQAVMGMEGINGLETTSNHILEVQSTLGIEAARRSIIKEIQYTMESHGMSI 182
            +NLLVEGT L+AVMG EG++G ETTSNHI E    LGIEAAR  IIKEIQYTM SHGMSI
Sbjct: 1239 YNLLVEGTNLKAVMGTEGVDGRETTSNHIFETVEVLGIEAARNGIIKEIQYTMGSHGMSI 1298

Query: 183  DIRHMMLLADVMT 221
            D RHMMLLADVMT
Sbjct: 1299 DQRHMMLLADVMT 1311


Top