BLASTX nr result

ID: Atractylodes21_contig00032211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032211
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE46416.1| TATA binding protein associated factor [Solanum ...   159   2e-40
ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248...   167   6e-39
ref|XP_002299594.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-35
ref|XP_002521336.1| protein with unknown function [Ricinus commu...   151   3e-34
ref|XP_002304140.1| predicted protein [Populus trichocarpa] gi|2...   148   3e-33

>dbj|BAE46416.1| TATA binding protein associated factor [Solanum tuberosum]
          Length = 638

 Score =  159 bits (402), Expect(2) = 2e-40
 Identities = 105/251 (41%), Positives = 128/251 (50%), Gaps = 5/251 (1%)
 Frame = +3

Query: 339  MGNATLTRSALMGQTGHLTMLPGXXXXXXXXXXXXXXXXX----PRQKAGLVQGSQFHPG 506
            MG+  L R+ALMGQTGHL ML G                     PRQKAGL+QG+QFH G
Sbjct: 216  MGSGNLARAALMGQTGHLPMLSGQAAVAAAAVAQFNLQSQFLNSPRQKAGLMQGNQFHTG 275

Query: 507  NTPXXXXXXXXXXXXXXXSYNLNSQIRANGSLAFTQQRINQGQMRPQ-LTQQNALASGQK 683
            N+                S N++SQ+RANG+LA+ Q R+NQ Q+R Q L+QQN+L + QK
Sbjct: 276  NS----HGQSLQAMGMMGSLNMSSQLRANGALAYAQ-RVNQSQLRQQQLSQQNSLTTTQK 330

Query: 684  LQAQSLSRTSFMNSQLSALGQNGQLAMMQNSLTQQQWSKQMPSMSAPNSPSYRXXXXXXX 863
            + AQSL RTSF NSQL  L QNGQ A+MQN+ +QQQW K MP++S PNSPS+R       
Sbjct: 331  ISAQSLPRTSFANSQLPGLTQNGQSAIMQNNSSQQQWLKPMPAISTPNSPSFR------- 383

Query: 864  XXXXXXXXXXXXXHNSMSLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP 1043
                          NSM LNP                                     SP
Sbjct: 384  -LQQQRQQMLLQHQNSMGLNPQQLSQIVQQQQQIGHPQMHQQQQQQQQQQQLSHQQQSSP 442

Query: 1044 RIAGSAGQKSL 1076
            R+A  AGQKSL
Sbjct: 443  RMAAPAGQKSL 453



 Score = 33.9 bits (76), Expect(2) = 2e-40
 Identities = 19/32 (59%), Positives = 20/32 (62%), Gaps = 7/32 (21%)
 Frame = +2

Query: 1070 ISLTGSQPD-------TPGGILSQWTETSNHL 1144
            +SLTGSQPD       TPGG  SQ TE SN L
Sbjct: 453  LSLTGSQPDATGSGTTTPGGSSSQGTEASNQL 484


>ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248501 [Vitis vinifera]
           gi|297743015|emb|CBI35882.3| unnamed protein product
           [Vitis vinifera]
          Length = 587

 Score =  167 bits (422), Expect = 6e-39
 Identities = 100/225 (44%), Positives = 115/225 (51%)
 Frame = +3

Query: 252 IYGQMNFASGXXXXXXXXXXXXXXXXXXXMGNATLTRSALMGQTGHLTMLPGXXXXXXXX 431
           +Y QMNF  G                    G   L+RSALMGQTGHL+ +          
Sbjct: 107 MYSQMNFG-GSAIQQAQNQQQLGGGAAGGGGGGNLSRSALMGQTGHLSPMLSGQAAAAAA 165

Query: 432 XXXXXXXXXPRQKAGLVQGSQFHPGNTPXXXXXXXXXXXXXXXSYNLNSQIRANGSLAFT 611
                    PRQKAGLVQGSQFHPGN P                 NL+SQ+R NG+L + 
Sbjct: 166 VAQFSLLTSPRQKAGLVQGSQFHPGNAPGQSLSGMQAIGMMGP-LNLSSQLRPNGTLTYA 224

Query: 612 QQRINQGQMRPQLTQQNALASGQKLQAQSLSRTSFMNSQLSALGQNGQLAMMQNSLTQQQ 791
           QQRINQGQMR QLTQQ+ L   Q       S  +FMN QLS+L QNGQ  M+QNSL+QQQ
Sbjct: 225 QQRINQGQMRQQLTQQSQLTPSQAQSRPRTSSLAFMNPQLSSLTQNGQPGMLQNSLSQQQ 284

Query: 792 WSKQMPSMSAPNSPSYRXXXXXXXXXXXXXXXXXXXXHNSMSLNP 926
           W KQMP+MS P SPSYR                     N M+LNP
Sbjct: 285 WLKQMPAMSTPGSPSYRLQPRQQVLYQQQLASSPQLHQNPMALNP 329


>ref|XP_002299594.1| predicted protein [Populus trichocarpa] gi|222846852|gb|EEE84399.1|
           predicted protein [Populus trichocarpa]
          Length = 656

 Score =  155 bits (392), Expect = 2e-35
 Identities = 94/199 (47%), Positives = 109/199 (54%), Gaps = 3/199 (1%)
 Frame = +3

Query: 252 IYGQMNFASGXXXXXXXXXXXXXXXXXXXMGNATLTRSALMGQTGHLTMLPGXXXXXXXX 431
           +YGQMNF                      +G A  +RSAL+GQTGHL ML G        
Sbjct: 128 LYGQMNFGGSASIQPNSQQNQQ-------LGGANSSRSALLGQTGHLPMLTGTAAAAAQL 180

Query: 432 XXXXXXXXXPRQKAGLVQGSQFHPGNTPXXXXXXXXXXXXXXXSYNLNSQIRANGSLAFT 611
                    PRQKAGLVQGSQFHPGN+P               S N+ SQIR NG+L + 
Sbjct: 181 NLPSQLLASPRQKAGLVQGSQFHPGNSPGQSLQGIQAMGVMG-SLNMGSQIRPNGALTYA 239

Query: 612 QQRINQGQMRPQLTQQNALASGQKLQAQSLSRT---SFMNSQLSALGQNGQLAMMQNSLT 782
           QQRIN G MR Q  QQN L S    Q QSL RT   ++MN Q+S L QN Q  MMQNSL+
Sbjct: 240 QQRINAGSMRQQPVQQNPLTS----QVQSLQRTPSMAYMNPQMSGLAQNAQPTMMQNSLS 295

Query: 783 QQQWSKQMPSMSAPNSPSY 839
           QQQW KQMP++S   SPS+
Sbjct: 296 QQQWLKQMPTISGSASPSF 314


>ref|XP_002521336.1| protein with unknown function [Ricinus communis]
           gi|223539414|gb|EEF41004.1| protein with unknown
           function [Ricinus communis]
          Length = 523

 Score =  151 bits (382), Expect = 3e-34
 Identities = 98/227 (43%), Positives = 112/227 (49%), Gaps = 2/227 (0%)
 Frame = +3

Query: 252 IYGQMNFASGXXXXXXXXXXXXXXXXXXXMGNATLTRSALMGQTGHLTMLPGXXXXXXXX 431
           +YGQ+NF+                       N  L+RSAL+GQ+GHL ML G        
Sbjct: 48  LYGQVNFSGSGSIQQNSHQ------------NQQLSRSALLGQSGHLPMLTGAGAVAAAA 95

Query: 432 XXXXXXXXX-PRQKAGLVQGSQFHPGNTPXXXXXXXXXXXXXXXSYNLNSQIRANGSLAF 608
                     PRQKAGLVQG+QFHPG++P               S NL SQ+R NG L F
Sbjct: 96  AAAQLNLLASPRQKAGLVQGTQFHPGSSPGQPLQGMQAMGMMG-SLNLTSQLRPNGPLTF 154

Query: 609 TQQRINQGQMRPQLTQQNALASGQKLQAQSLSRTSFMNSQLSALGQNGQLAMMQNSLTQQ 788
            QQR+N GQMR QL QQN L S Q       S  +FMN QLS L QN Q +MMQNSL QQ
Sbjct: 155 AQQRLNAGQMRQQLAQQNPLTSSQVPNLSRTSSLAFMNPQLSGLTQNAQPSMMQNSLPQQ 214

Query: 789 QWSKQMPSMSAPNSPSYRXXXXXXXXXXXXXXXXXXXXH-NSMSLNP 926
           QW KQM  M  P SPS R                    H NSM+LNP
Sbjct: 215 QWLKQMTGMPGPASPSLRLQQRQSQVLLQQQLASSSQLHQNSMTLNP 261


>ref|XP_002304140.1| predicted protein [Populus trichocarpa] gi|222841572|gb|EEE79119.1|
           predicted protein [Populus trichocarpa]
          Length = 655

 Score =  148 bits (373), Expect = 3e-33
 Identities = 98/230 (42%), Positives = 117/230 (50%), Gaps = 6/230 (2%)
 Frame = +3

Query: 252 IYGQMNFASGXXXXXXXXXXXXXXXXXXXMGNATLTRSALMGQTGHLTMLPGXXXXXXXX 431
           +YGQMNF                      +G A L+RSAL+GQTGHL M  G        
Sbjct: 144 LYGQMNFGGSASIQQNSQQNQQ-------LGGANLSRSALLGQTGHLPMFTGAAAAAAAA 196

Query: 432 XXXXXXXXX--PRQKAGLVQGSQFHPGNTPXXXXXXXXXXXXXXXSYNLNSQIRANGSLA 605
                      PRQKAGL QGSQFH G++P               S NL SQ+R NG+LA
Sbjct: 197 QLNLPSQLLASPRQKAGLAQGSQFHSGDSPGQSLQGIQAMGVMGSSLNL-SQLRPNGALA 255

Query: 606 FTQQRINQGQMRPQLTQQNALASGQKLQAQSLSRT---SFMNSQLSALGQNGQLAMMQNS 776
           + QQR++ G MR QL QQN+L S    Q QSL RT   ++MN Q+S L QN Q  MMQ+S
Sbjct: 256 YAQQRMSAGSMRQQLVQQNSLTS----QVQSLQRTQSLAYMNHQMSGLAQNAQPTMMQSS 311

Query: 777 LTQQQWSKQMPSMSAPNSPSYRXXXXXXXXXXXXXXXXXXXXH-NSMSLN 923
           L+QQQW KQMP+MS P SPS                      H NSM+LN
Sbjct: 312 LSQQQWLKQMPTMSGPASPSLHLQQRQSQAFLQQQLASSGQLHQNSMALN 361


Top