BLASTX nr result

ID: Atractylodes21_contig00032157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032157
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   126   2e-27
ref|XP_002304565.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_004143861.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   115   4e-24
ref|XP_003530445.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   115   6e-24
ref|XP_002518854.1| ring finger protein, putative [Ricinus commu...   115   6e-24

>ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a [Vitis vinifera]
           gi|297742383|emb|CBI34532.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  126 bits (317), Expect = 2e-27
 Identities = 68/170 (40%), Positives = 99/170 (58%), Gaps = 32/170 (18%)
 Frame = -1

Query: 509 EMGSKINLEDKLTVILFDEDLYAKDSMCCVCLGEFEINEKLHQIPSCQHVFHGDCIRNWL 330
           E+G K  L+ KL  ILFD++L A+DS+CCVCLGEFEI E+LHQ+PSC+HVFH DCI +WL
Sbjct: 76  EIGLKGELKGKLPTILFDDELKARDSLCCVCLGEFEIKEELHQVPSCKHVFHADCIYHWL 135

Query: 329 HSNTTCPLCRCSVIIAAKDSHH-EPLVVPEPATTIMSSNSQEVPLE-------------- 195
            +N+TCPLCRCSV    K  +   P+    P     + + Q V  +              
Sbjct: 136 RTNSTCPLCRCSVFPNTKAGNPVSPVRSEHPDNQNSNQHRQNVSSQQQEENIGVRLDISD 195

Query: 194 ----QRVVIFEGSSSASI-------------DSKLSHPNEESVVVNVPIH 96
               Q++V  +GSSS+S+             DS++ + ++ES+V+++  H
Sbjct: 196 SSSGQQMVPTDGSSSSSLREPGRSSELPTCMDSEMGYRDQESIVLHIETH 245


>ref|XP_002304565.1| predicted protein [Populus trichocarpa] gi|222841997|gb|EEE79544.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  117 bits (294), Expect = 1e-24
 Identities = 70/175 (40%), Positives = 90/175 (51%), Gaps = 34/175 (19%)
 Frame = -1

Query: 512 SEMGSKINLEDKLTVILFDEDLYAKDSMCCVCLGEFEINEKLHQIPSCQHVFHGDCIRNW 333
           S +  K  + +KL  +LFDE+L  KDS CCVCLGEFEI E+L QIPSC+HVFH DCI +W
Sbjct: 73  SSIYQKEEITNKLPTVLFDEELRTKDSQCCVCLGEFEIKEELLQIPSCKHVFHIDCIHHW 132

Query: 332 LHSNTTCPLCRCSVIIAAKDSHHEPLVVPEPATTIMSS----------------NSQEV- 204
           LHSN+TCPLCRC VI  A      P     P   + SS                  Q+V 
Sbjct: 133 LHSNSTCPLCRCYVIFPANIFCTNPPQSSGPVLLLQSSVGANSHQPQNITSELQQQQDVG 192

Query: 203 --PLEQRVVIFEGSSSA---------------SIDSKLSHPNEESVVVNVPIHDS 90
               EQ V+  E  SS                S+++    PN ESV++++  H +
Sbjct: 193 AGSTEQLVIPMEEPSSVTSQLRDSSRLPELSISMENGRGSPNGESVILHIQRHST 247


>ref|XP_004143861.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Cucumis sativus]
           gi|449532338|ref|XP_004173139.1| PREDICTED: RING-H2 zinc
           finger protein RHA4a-like [Cucumis sativus]
          Length = 196

 Score =  115 bits (289), Expect = 4e-24
 Identities = 57/98 (58%), Positives = 71/98 (72%)
 Frame = -1

Query: 491 NLEDKLTVILFDEDLYAKDSMCCVCLGEFEINEKLHQIPSCQHVFHGDCIRNWLHSNTTC 312
           NL DKL  I F+E+L  +DS+CCVCLGEFEI E+L Q+PSC+HVFH DC+ +WL SN+TC
Sbjct: 89  NLIDKLPKIQFNEELKIRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLISNSTC 148

Query: 311 PLCRCSVIIAAKDSHHEPLVVPEPATTIMSSNSQEVPL 198
           PLCRCSVI   + S  +P VVP P   +    S E+PL
Sbjct: 149 PLCRCSVIPTTQCS--DPAVVP-PTPPLPLPGSSELPL 183


>ref|XP_003530445.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 209

 Score =  115 bits (288), Expect = 6e-24
 Identities = 59/118 (50%), Positives = 77/118 (65%), Gaps = 13/118 (11%)
 Frame = -1

Query: 482 DKLTVILFDEDLYAKDSMCCVCLGEFEINEKLHQIPSCQHVFHGDCIRNWLHSNTTCPLC 303
           DKL  ILFDEDL  +DS+CCVCLGEFE+NE+L QIP C HVFH  CI NWL SN+TCPLC
Sbjct: 90  DKLPRILFDEDLRTRDSVCCVCLGEFELNEELLQIPYCNHVFHISCICNWLQSNSTCPLC 149

Query: 302 RCSVIIAAKD-SHHEPLVVPEP---------ATTIMS---SNSQEVPLEQRVVIFEGS 168
           RCS+I ++K  +   P+++ +P         ++ IMS      +EV       IF+G+
Sbjct: 150 RCSIIPSSKFLNPAPPIIISDPPQQGGISGSSSHIMSLPHQQEEEVGASTNTTIFQGN 207


>ref|XP_002518854.1| ring finger protein, putative [Ricinus communis]
           gi|223541841|gb|EEF43387.1| ring finger protein,
           putative [Ricinus communis]
          Length = 265

 Score =  115 bits (288), Expect = 6e-24
 Identities = 49/75 (65%), Positives = 62/75 (82%)
 Frame = -1

Query: 509 EMGSKINLEDKLTVILFDEDLYAKDSMCCVCLGEFEINEKLHQIPSCQHVFHGDCIRNWL 330
           ++G K  ++DKL ++LFDEDL  ++S CCVCLGEFE+ E+L QIPSC+HVFH +CI +WL
Sbjct: 77  QIGLKKEIKDKLPIVLFDEDLKTRESQCCVCLGEFEMKEELLQIPSCKHVFHIECIHHWL 136

Query: 329 HSNTTCPLCRCSVII 285
           HSNTTCPLCR  VII
Sbjct: 137 HSNTTCPLCRSFVII 151


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