BLASTX nr result
ID: Atractylodes21_contig00032154
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00032154
(591 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 74 9e-17
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 74 1e-16
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 62 6e-14
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 65 1e-13
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 80 3e-13
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 74.3 bits (181), Expect(2) = 9e-17
Identities = 37/100 (37%), Positives = 51/100 (51%)
Frame = +1
Query: 1 LVSHIWDLLRGKDSIWVRWIHHHRLAHVNFWEVKAVCGRDSWMWRKLLLLRDWGRLHFFN 180
L+ IW L S+W +W HHRL H +FW+V A+ D W W+ LL LR
Sbjct: 740 LLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNAL-QTDPWTWKMLLNLRPLAEKFIKA 798
Query: 181 KIGDGALTNAWSDHWLDCGPLIRIITPG*SMVLDLVWEAK 300
K+G+G + W D W GPLI+ + S L + + AK
Sbjct: 799 KVGNGGTVSFWFDCWTSLGPLIKYLGDVGSRPLRIPFSAK 838
Score = 37.7 bits (86), Expect(2) = 9e-17
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 4/103 (3%)
Frame = +3
Query: 294 SKVQEVVSGLGGQWPSSWPVHVPC----LSEVQLPVSLHDCSDVVMWKAVGGGLKQFFSK 461
+KV + + G G + P S + L+ + P L SD W + F +
Sbjct: 837 AKVADAIDGSGWRLPLSRSLTADSILSHLASLPPPSPLM-VSDSYSWCVDDVDCQGFSAA 895
Query: 462 EASASLWPSADRVPWFHLVWPKVHIPKHAFTLWLAVRNGLPTQ 590
+ L P W VW K +PKHAF W A N LPT+
Sbjct: 896 KTWEVLRPRRPVKRWARSVWFKGAVPKHAFNFWTAQLNRLPTR 938
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 74.3 bits (181), Expect(2) = 1e-16
Identities = 37/100 (37%), Positives = 51/100 (51%)
Frame = +1
Query: 1 LVSHIWDLLRGKDSIWVRWIHHHRLAHVNFWEVKAVCGRDSWMWRKLLLLRDWGRLHFFN 180
L+ IW L S+W +W HHRL H +FW+V A+ D W W+ LL LR
Sbjct: 740 LLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNAL-QTDPWTWKMLLNLRPLAEKFIKA 798
Query: 181 KIGDGALTNAWSDHWLDCGPLIRIITPG*SMVLDLVWEAK 300
K+G+G + W D W GPLI+ + S L + + AK
Sbjct: 799 KVGNGGTVSFWFDCWTSLGPLIKYLGDVGSRPLRIPFSAK 838
Score = 37.4 bits (85), Expect(2) = 1e-16
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 4/103 (3%)
Frame = +3
Query: 294 SKVQEVVSGLGGQWPSSWPVHVPC----LSEVQLPVSLHDCSDVVMWKAVGGGLKQFFSK 461
+KV + + G G + P S + L+ + P L SD W + F +
Sbjct: 837 AKVADAIDGSGWRLPLSRSLTADSILSHLASLPPPSPLM-VSDSYSWCVDDVDCQGFSAA 895
Query: 462 EASASLWPSADRVPWFHLVWPKVHIPKHAFTLWLAVRNGLPTQ 590
+ L P W VW K +PKHAF W A N LPT+
Sbjct: 896 KTWEVLRPRRPVKRWAKSVWFKGAVPKHAFNFWTAQLNRLPTR 938
>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
predicted protein [Populus trichocarpa]
Length = 517
Score = 62.0 bits (149), Expect(2) = 6e-14
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 LVSHIWDLLRGKD-SIWVRWIHHHRLAHVNFWEVKAVCGRDSWMWRKLLLLRD--WGRLH 171
L+ HIW+L D SIW WI + L NFW +K SW W K+L LR W ++
Sbjct: 174 LLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTP-QNCSWAWGKILKLRSLAWPKMK 232
Query: 172 FFNKIGDGALTNAWSDHWLDCGPL 243
+ IGDG T+ W D+W PL
Sbjct: 233 YI--IGDGMTTSLWFDNWHPHSPL 254
Score = 40.4 bits (93), Expect(2) = 6e-14
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +3
Query: 252 HNSRMIHGAGFGMGSKVQEVVSGLGGQWPSS----WPVHVPCLSEVQLPVSLHDCSDVVM 419
+ R I+ +G +KV ++ + P++ W + + P D ++
Sbjct: 258 YGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQ--KDELV 315
Query: 420 WKAVGGGLKQFFSKEASASLWPSADRVPWFHLVWPKVHIPKHAFTLWLAVRNGLPTQ 590
W + +F K A L V W +VW K +P+H+F LW+AV+ L TQ
Sbjct: 316 W--LDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQ 370
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 65.1 bits (157), Expect(2) = 1e-13
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Frame = +1
Query: 13 IWDLLRGKDSIWVRWIHHHRLAHVNFWEVKAVCGRDSWMWRKLLLLRDWGRLHFFNKIGD 192
IW LL +DS+WV+W + L +FW + SW+WR+LL R+ + ++ +
Sbjct: 612 IWRLLSCQDSLWVKWTRMNLLKKESFWSIGTHSTLGSWIWRRLLKHREVAKSFCKIEVNN 671
Query: 193 GALTNAWSDHWLDCGPLIRI------ITPG*S--MVLDLVWEAKCRRWFRV 321
G T+ W D+W + GPLI + I G S M L W + R+ RV
Sbjct: 672 GVNTSFWFDNWSEKGPLINLTGARGAIDMGISRHMTLAEAWSRRRRKRHRV 722
Score = 36.2 bits (82), Expect(2) = 1e-13
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 399 DCSDVVMWKAVGGGLKQFFS-KEASASLWPSADRVPWFHLVWPKVHIPKHAFTLWLAVRN 575
+ D ++W+ K FS K+ + S+++ W VW PK +F WLA+RN
Sbjct: 742 ELEDAILWRGKEDVFKARFSTKDTWNHIRTSSNQRAWHKGVWFAHATPKFSFCAWLAIRN 801
Query: 576 GLPT 587
L T
Sbjct: 802 RLST 805
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 79.7 bits (195), Expect = 3e-13
Identities = 35/81 (43%), Positives = 47/81 (58%)
Frame = +1
Query: 13 IWDLLRGKDSIWVRWIHHHRLAHVNFWEVKAVCGRDSWMWRKLLLLRDWGRLHFFNKIGD 192
IW L +DS+WV W H +RL HVNFW +A SW+W+ +L LR + +G+
Sbjct: 883 IWMLFARRDSLWVAWNHANRLRHVNFWNAEA-ASHHSWIWKAILGLRPLAKRFLRGAVGN 941
Query: 193 GALTNAWSDHWLDCGPLIRII 255
G L + W DHW + GPLI I
Sbjct: 942 GQLLSYWYDHWSNLGPLIEAI 962