BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032077
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-...    82   6e-14
gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]    65   4e-09
ref|XP_002519884.1| replication factor A 1, rfa1, putative [Rici...    65   4e-09
gb|ELR21299.1| uracilDNA glycosylase [Acanthamoeba castellanii s...    63   3e-08
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    62   5e-08

>ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 894

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/70 (54%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = -2

Query: 221 ECYKCHQVGHWVRDCPGVSNIP-LSYGSESVAPGRIHSGMPQVGQNIVASGECYKCHQSG 45
           ECYKCHQ GH+ RDCPG S  P  SYGS S   G               SGEC+KCHQ+G
Sbjct: 813 ECYKCHQSGHYARDCPGFSAAPPSSYGSNSGGGG---------------SGECFKCHQTG 857

Query: 44  HWTRDCPSVS 15
           HW RDCP +S
Sbjct: 858 HWARDCPGLS 867



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 22/34 (64%), Positives = 25/34 (73%)
 Frame = -2

Query: 221 ECYKCHQVGHWVRDCPGVSNIPLSYGSESVAPGR 120
           EC+KCHQ GHW RDCPG+S  P SYGS +   GR
Sbjct: 849 ECFKCHQTGHWARDCPGLSAAPSSYGSANAMQGR 882



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/72 (40%), Positives = 34/72 (47%)
 Frame = -2

Query: 218 CYKCHQVGHWVRDCPGVSNIPLSYGSESVAPGRIHSGMPQVGQNIVASGECYKCHQSGHW 39
           C  C   GH    CP + N+P      S   G  +     +G    AS ECYKCHQSGH+
Sbjct: 768 CTNCGVSGHSSALCPNIRNVP----GHSAGGGFANRASAGLGGGGGASVECYKCHQSGHY 823

Query: 38  TRDCPSVSNVLP 3
            RDCP  S   P
Sbjct: 824 ARDCPGFSAAPP 835


>gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]
          Length = 369

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/69 (43%), Positives = 37/69 (53%)
 Frame = -2

Query: 221 ECYKCHQVGHWVRDCPGVSNIPLSYGSESVAPGRIHSGMPQVGQNIVASGECYKCHQSGH 42
           ECYKC + GHW RDC   S      G+ +  PG++ S          +SGECYKC + GH
Sbjct: 266 ECYKCGKQGHWARDCTAQS------GNPTYEPGKVKSSS--------SSGECYKCGKQGH 311

Query: 41  WTRDCPSVS 15
           W RDC   S
Sbjct: 312 WARDCTGQS 320



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/68 (45%), Positives = 36/68 (52%)
 Frame = -2

Query: 218 CYKCHQVGHWVRDCPGVSNIPLSYGSESVAPGRIHSGMPQVGQNIVASGECYKCHQSGHW 39
           CYKC + GHW RDC   S IP S     + P R  S          A+GECYKC + GHW
Sbjct: 231 CYKCGKEGHWARDCTLQSPIPPS----EMGPVRSTS----------AAGECYKCGKQGHW 276

Query: 38  TRDCPSVS 15
            RDC + S
Sbjct: 277 ARDCTAQS 284



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/65 (41%), Positives = 35/65 (53%)
 Frame = -2

Query: 221 ECYKCHQVGHWVRDCPGVSNIPLSYGSESVAPGRIHSGMPQVGQNIVASGECYKCHQSGH 42
           ECYKC + GHW RDC G S      G++    G+  S          ++G+CYKC + GH
Sbjct: 302 ECYKCGKQGHWARDCTGQS------GNQQFQSGQAKSTS--------SAGDCYKCGKPGH 347

Query: 41  WTRDC 27
           W RDC
Sbjct: 348 WARDC 352


>ref|XP_002519884.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223540930|gb|EEF42488.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 901

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = -2

Query: 221 ECYKCHQVGHWVRDCPGVSNIPLSYGSESVAPGR 120
           ECYKCHQVGHW RDCPG++NIP +YGS +++ GR
Sbjct: 845 ECYKCHQVGHWARDCPGLNNIPPAYGSTAISSGR 878



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = -2

Query: 218  CYKCHQVGHWVRDCPGVSNIPLSYGSESVAPGRIHSGMPQ-VGQNIVASGECYKCHQSGH 42
            C  C    H   +CP   N P        + G  ++  P  +  +  A GECYKCHQ GH
Sbjct: 801  CISCGATSHSSANCPSTINAPRQ------SAGGFYANQPSSLAGSAGAGGECYKCHQVGH 854

Query: 41   WTRDCPSVSNVLP 3
            W RDCP ++N+ P
Sbjct: 855  WARDCPGLNNIPP 867


>gb|ELR21299.1| uracilDNA glycosylase [Acanthamoeba castellanii str. Neff]
          Length = 531

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = -2

Query: 218 CYKCHQVGHWVRDCPGVSNIPLSYGSESVAPGRIHSGMPQVGQNIVASGE-CYKCHQSGH 42
           C+KC++ GHW RDCP            S   G  + G    G    +SG  CYKC+++GH
Sbjct: 422 CFKCNETGHWARDCPSAG--------ASGGGGGSYGGRGGGGGGGASSGRPCYKCNETGH 473

Query: 41  WTRDCPS 21
           W RDCPS
Sbjct: 474 WARDCPS 480



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/69 (40%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = -2

Query: 218 CYKCHQVGHWVRDCPGVSNIPLSYGSESVAPGRIHSGMPQVGQNIVASGE---CYKCHQS 48
           CYKC++ GHW RDCP         G      G  + G    G+     G    CYKC++ 
Sbjct: 465 CYKCNETGHWARDCPSAGG---GGGGGYGGGGGGYGGGGFGGRGGGGGGSSRPCYKCNEV 521

Query: 47  GHWTRDCPS 21
           GHW RDCPS
Sbjct: 522 GHWARDCPS 530


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355513943|gb|AES95566.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 1723

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/69 (40%), Positives = 36/69 (52%)
 Frame = -2

Query: 221 ECYKCHQVGHWVRDCPGVSNIPLSYGSESVAPGRIHSGMPQVGQNIVASGECYKCHQSGH 42
           +CYKC Q GHW  +CP +S           A  R+  G         ASG CYKC+Q GH
Sbjct: 826 KCYKCQQPGHWASNCPSMS-----------AANRVSGGSGG------ASGNCYKCNQPGH 868

Query: 41  WTRDCPSVS 15
           W  +CP++S
Sbjct: 869 WANNCPNMS 877