BLASTX nr result

ID: Atractylodes21_contig00032076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032076
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-...   216   3e-54
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]   216   3e-54
ref|NP_199353.1| replication factor-A protein 1-like protein [Ar...   214   2e-53
ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-...   212   5e-53
ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-...   212   5e-53

>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Vitis vinifera]
          Length = 882

 Score =  216 bits (551), Expect = 3e-54
 Identities = 102/151 (67%), Positives = 122/151 (80%)
 Frame = +1

Query: 1    MLGDRKCSKKVVNNGDGKWRCDKCDKTVDECDYRYILQLQIQDHTGLTWTTAFQETGEEI 180
            M+GDR+C+KKV NNGDGKWRC++CD++VD+CDYRYILQ QIQDHTGLTW TAFQE GEEI
Sbjct: 577  MIGDRQCNKKVTNNGDGKWRCERCDQSVDDCDYRYILQFQIQDHTGLTWVTAFQECGEEI 636

Query: 181  IGVSAKELYFMKHEEQDEEKFTETIRNVTGNKYSFKLKVKEESYGDEQRVKSTVVKAEKI 360
            +G+SAK LY++K+EEQD+EKF E +R V   KYSFKLKVKEE + DEQRVKSTVVKAEK+
Sbjct: 637  MGISAKNLYYLKYEEQDDEKFGEILRGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKV 696

Query: 361  NFSSNTKFLLLEIQRMHEDPIHIHKVGSPHF 453
            NFSS ++FLL        D +  HKV    F
Sbjct: 697  NFSSESRFLL--------DMVEKHKVEDSTF 719


>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
          Length = 882

 Score =  216 bits (551), Expect = 3e-54
 Identities = 102/151 (67%), Positives = 122/151 (80%)
 Frame = +1

Query: 1    MLGDRKCSKKVVNNGDGKWRCDKCDKTVDECDYRYILQLQIQDHTGLTWTTAFQETGEEI 180
            M+GDR+C+KKV NNGDGKWRC++CD++VD+CDYRYILQ QIQDHTGLTW TAFQE GEEI
Sbjct: 577  MIGDRQCNKKVTNNGDGKWRCERCDQSVDDCDYRYILQFQIQDHTGLTWVTAFQECGEEI 636

Query: 181  IGVSAKELYFMKHEEQDEEKFTETIRNVTGNKYSFKLKVKEESYGDEQRVKSTVVKAEKI 360
            +G+SAK LY++K+EEQD+EKF E +R V   KYSFKLKVKEE + DEQRVKSTVVKAEK+
Sbjct: 637  MGISAKNLYYLKYEEQDDEKFGEILRGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKV 696

Query: 361  NFSSNTKFLLLEIQRMHEDPIHIHKVGSPHF 453
            NFSS ++FLL        D +  HKV    F
Sbjct: 697  NFSSESRFLL--------DMVEKHKVEDSTF 719


>ref|NP_199353.1| replication factor-A protein 1-like protein [Arabidopsis thaliana]
            gi|9758730|dbj|BAB09168.1| replication protein A1-like
            [Arabidopsis thaliana] gi|332007861|gb|AED95244.1|
            replication factor-A protein 1-like protein [Arabidopsis
            thaliana]
          Length = 853

 Score =  214 bits (544), Expect = 2e-53
 Identities = 97/136 (71%), Positives = 117/136 (86%)
 Frame = +1

Query: 1    MLGDRKCSKKVVNNGDGKWRCDKCDKTVDECDYRYILQLQIQDHTGLTWTTAFQETGEEI 180
            M GDR CSKKV NNGDG WRC+KCDK VDECDYRYILQ+Q+QDHT LTW TAFQE GEEI
Sbjct: 605  MNGDRPCSKKVTNNGDGTWRCEKCDKCVDECDYRYILQIQLQDHTDLTWATAFQEAGEEI 664

Query: 181  IGVSAKELYFMKHEEQDEEKFTETIRNVTGNKYSFKLKVKEESYGDEQRVKSTVVKAEKI 360
            +G+SAK+LY++K+E QDEEKF + IR+V   KY FKLK+KEE+Y DEQRVK+TVVKAEK+
Sbjct: 665  MGMSAKDLYYVKYENQDEEKFEDIIRSVAFTKYIFKLKIKEETYSDEQRVKATVVKAEKL 724

Query: 361  NFSSNTKFLLLEIQRM 408
            N+SSNT+F+L  I ++
Sbjct: 725  NYSSNTRFMLEAIDKL 740


>ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 425

 Score =  212 bits (540), Expect = 5e-53
 Identities = 96/136 (70%), Positives = 118/136 (86%)
 Frame = +1

Query: 1   MLGDRKCSKKVVNNGDGKWRCDKCDKTVDECDYRYILQLQIQDHTGLTWTTAFQETGEEI 180
           M+GDR+CSKKV NNGDGKWRCD+CD++VDECDYRYILQLQIQDHTGLTW TAFQE GEEI
Sbjct: 137 MIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVTAFQEGGEEI 196

Query: 181 IGVSAKELYFMKHEEQDEEKFTETIRNVTGNKYSFKLKVKEESYGDEQRVKSTVVKAEKI 360
           +G+ AK LY++K+EEQD+EKF E IR V   K+  KLK+KEE++ DEQRV+STVVKAE I
Sbjct: 197 MGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAESI 256

Query: 361 NFSSNTKFLLLEIQRM 408
           NFSS ++FLL  ++++
Sbjct: 257 NFSSESRFLLNLMEKL 272


>ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 861

 Score =  212 bits (540), Expect = 5e-53
 Identities = 96/136 (70%), Positives = 118/136 (86%)
 Frame = +1

Query: 1   MLGDRKCSKKVVNNGDGKWRCDKCDKTVDECDYRYILQLQIQDHTGLTWTTAFQETGEEI 180
           M+GDR+CSKKV NNGDGKWRCD+CD++VDECDYRYILQLQIQDHTGLTW TAFQE GEEI
Sbjct: 573 MIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVTAFQEGGEEI 632

Query: 181 IGVSAKELYFMKHEEQDEEKFTETIRNVTGNKYSFKLKVKEESYGDEQRVKSTVVKAEKI 360
           +G+ AK LY++K+EEQD+EKF E IR V   K+  KLK+KEE++ DEQRV+STVVKAE I
Sbjct: 633 MGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAESI 692

Query: 361 NFSSNTKFLLLEIQRM 408
           NFSS ++FLL  ++++
Sbjct: 693 NFSSESRFLLNLMEKL 708


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