BLASTX nr result

ID: Atractylodes21_contig00032075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032075
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627116.1| F-box/LRR-repeat protein [Medicago truncatul...   122   8e-26
ref|XP_003606020.1| F-box family protein [Medicago truncatula] g...   117   3e-24
ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatul...   115   7e-24
ref|XP_003526558.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   108   1e-21
ref|XP_003598149.1| F-box family-3 [Medicago truncatula] gi|3554...   106   6e-21

>ref|XP_003627116.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355521138|gb|AET01592.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 425

 Score =  122 bits (306), Expect = 8e-26
 Identities = 90/265 (33%), Positives = 129/265 (48%), Gaps = 39/265 (14%)
 Frame = +3

Query: 3   RLSSLPDELIHRILSCIDIKFAIQTCLLSPRWKFVWTSMPCLNFSSWDFDSLPKFAKFVT 182
           RL  +PD LIH ILS ++ + AI+TC+LS RW+++W S+PCL F+S  F  L  F KFV 
Sbjct: 37  RLGDMPDCLIHHILSFMETRDAIRTCVLSKRWRYIWKSIPCLYFNSKSFTRLVDFKKFVL 96

Query: 183 HFLSHR--NHQTEVSSVKLDFRGAASQVFVRKIVNYALSHNVQEIAVLSWPNKNN----E 344
             LSHR  +H   +   +     A  Q  + K++ YA  H V+EI +      +     E
Sbjct: 97  WVLSHRDNSHVKVLIYYRFGVDYATDQYLLNKVIEYAALHGVEEIRINLRAKTSGCPPIE 156

Query: 345 FPPCLFHAQSLK---------------------------HFTL---SSDLHAPCRTPKTP 434
            P  LF  QSLK                           HF++   ++D   P  +    
Sbjct: 157 IPLPLFTCQSLKRLELKDCHPTNVSSPFGCKSLDILHLEHFSMFPTAADFSNPFASLSEL 216

Query: 435 WDFPALTSLYLNAITLCDDNNERSLDLFSKCVNLKNLTLERFIVK---AVEVFDIISPRL 605
           + F  LT+L+LN+  LC    E  LD F+ CVNLK L L     K   + + F I +P+L
Sbjct: 217 FGFTTLTALHLNSFALCYTGME-CLDPFANCVNLKILQLSEMSFKSDLSPKDFVISAPQL 275

Query: 606 SNLTLVHVSCSKVINLIAPQLENLT 680
           SNL+L+       I + +PQL N +
Sbjct: 276 SNLSLICNRFRCKIAVTSPQLLNFS 300


>ref|XP_003606020.1| F-box family protein [Medicago truncatula]
           gi|357476013|ref|XP_003608292.1| F-box family protein
           [Medicago truncatula] gi|355507075|gb|AES88217.1| F-box
           family protein [Medicago truncatula]
           gi|355509347|gb|AES90489.1| F-box family protein
           [Medicago truncatula]
          Length = 489

 Score =  117 bits (292), Expect = 3e-24
 Identities = 84/227 (37%), Positives = 118/227 (51%), Gaps = 6/227 (2%)
 Frame = +3

Query: 6   LSSLPDELIHRILSCIDIKFAIQTCLLSPRWKFVWTSMPCLNFSSWDFDSLPKFAKFVTH 185
           LS LPD +I  ILS ++ K A++TC+LS RWK VW  +P L   S DF +   F KFV+ 
Sbjct: 31  LSDLPDCVILHILSFLNAKEAVRTCILSNRWKNVWKCVPTLVLHSSDFSTFKNFTKFVSK 90

Query: 186 FLSHRNHQTEVSSVKLDFRGAASQVFVRKIVNYALSHNVQEIAVLSWPNKNNEFPPCLFH 365
            LSHR+    +  +  +  G+     +++IVNYA SHNVQ + + S         PC+  
Sbjct: 91  ILSHRDGTIALQELDFERVGSIEPHLLKRIVNYAFSHNVQRLGI-SVKGDICHILPCVSS 149

Query: 366 AQSLKHFTLS---SDLHAPCRT--PKTPWDFPALTSLYLNAITLCDDNNERSLDLFSKCV 530
            ++L    LS      H   RT  PK+  D PALTSL+L     C  +  R+ + FS   
Sbjct: 150 CRTLTSLKLSVSPKGRHNYGRTLFPKS-LDLPALTSLHLGNFVFCASDKGRT-EPFSGFN 207

Query: 531 NLKNLTLERFIVKAVEVFDIISPRLSNLTL-VHVSCSKVINLIAPQL 668
            L +L ++   VK  ++  I+S  L NLT+  H S    I L AP L
Sbjct: 208 KLNSLVIDNCTVKDAQILCILSETLVNLTMRNHSSDVYKIELSAPSL 254


>ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355487958|gb|AES69161.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 354

 Score =  115 bits (289), Expect = 7e-24
 Identities = 78/232 (33%), Positives = 119/232 (51%)
 Frame = +3

Query: 3   RLSSLPDELIHRILSCIDIKFAIQTCLLSPRWKFVWTSMPCLNFSSWDFDSLPKFAKFVT 182
           RLS LPD ++  ILS  + K A QTC+LS RWK +W  +  L  S+  F+++  F KFV+
Sbjct: 13  RLSDLPDSVVLHILSFFNTKEAAQTCILSKRWKNLWKFVTTLKLSTRHFETIHPFTKFVS 72

Query: 183 HFLSHRNHQTEVSSVKLDFRGAASQVFVRKIVNYALSHNVQEIAVLSWPNKNNEFPPCLF 362
           H LSHR+  T + ++            ++KIV YA+SH+VQ++ + S       FPPC F
Sbjct: 73  HVLSHRDDSTALQALDSHRASIVEAYLLKKIVKYAVSHSVQQLQI-SVDADFQCFPPCFF 131

Query: 363 HAQSLKHFTLSSDLHAPCRTPKTPWDFPALTSLYLNAITLCDDNNERSLDLFSKCVNLKN 542
              +L    LS   +          + PALTSL L +    + ++ R ++ FSK   L +
Sbjct: 132 SCNTLTSLKLSLGFNT---LFPNFLNLPALTSLSLRSFVFHNSDDGR-VEPFSKFKMLNS 187

Query: 543 LTLERFIVKAVEVFDIISPRLSNLTLVHVSCSKVINLIAPQLENLTAIDCSI 698
           L ++  +V   +   I SP+L +LT++       I L  P L   T   C+I
Sbjct: 188 LIIDSCMVCDAQNLCISSPKLVSLTILQSYFG--IELSVPSLHTFTFTGCTI 237


>ref|XP_003526558.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g78750-like [Glycine
           max]
          Length = 384

 Score =  108 bits (269), Expect = 1e-21
 Identities = 73/214 (34%), Positives = 117/214 (54%), Gaps = 8/214 (3%)
 Frame = +3

Query: 3   RLSSLPDELIHRILSCIDIKFAIQTCLLSPRWKFVWTSMPCLNFSSWDFDSLPKFAKFVT 182
           RLS LP+ ++  IL+ ++ K A++TC+LS RWK +W  +P L   S DF +   F KFV+
Sbjct: 17  RLSDLPECVLLHILTFLNAKHAVRTCVLSTRWKDLWKRLPTLILHSSDFWTFKGFTKFVS 76

Query: 183 HFLSHRNHQTEVSSVKLDF--RGAASQVFVRKIVNYALSHNVQEIAVLSWPNKNNEFPPC 356
             LS R+    ++ +KLDF   G      +++IV YA+SHNV+++ + S      + P C
Sbjct: 77  RLLSLRD--ASLALLKLDFERHGCIEPQLLKRIVKYAVSHNVRQLGI-SVKCDIRDVPQC 133

Query: 357 LFHAQSLKHFTLS----SDLHAPCRTPKTPWDFPALTSLYLNAITLC--DDNNERSLDLF 518
           +F  Q+L    LS      ++     PK+  +  ALT+L+L   T C  DD+++   + F
Sbjct: 134 VFSCQTLTSLKLSVCPRGYIYGSTLFPKS-LNLTALTTLHLQHFTFCKGDDDDDDMAEPF 192

Query: 519 SKCVNLKNLTLERFIVKAVEVFDIISPRLSNLTL 620
             C  L +LT++   VK   +  I S  L +LT+
Sbjct: 193 YACRRLCDLTIDYCTVKDARILCISSATLVSLTM 226


>ref|XP_003598149.1| F-box family-3 [Medicago truncatula] gi|355487197|gb|AES68400.1|
           F-box family-3 [Medicago truncatula]
          Length = 376

 Score =  106 bits (264), Expect = 6e-21
 Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 10/227 (4%)
 Frame = +3

Query: 3   RLSSLPDELIHRILSCIDIKFAIQTCLLSPRWKFVWTSMPCLNFSSWDFDSLPKFAKFVT 182
           R+S L D L+H ILS ++ K A+QTC+LS RW  +W ++  L  S   F +   F +F++
Sbjct: 12  RMSELSDNLLHHILSFLNAKEAVQTCILSKRWINLWKTLSTLTLSVDHFSTEESFEQFIS 71

Query: 183 HFLSHRNHQTEVSSVKLDFR--GAASQVFVRKIVNYALSHNVQEIAVLSWPNKNNEFPPC 356
             LS R+H T++ S+   F+     S+    K + YA SHNVQ   +L    K+   P C
Sbjct: 72  MLLSLRDHSTDIHSLVFHFQWTHVLSRDLYLKTIEYAFSHNVQHFQILYTAVKH--LPSC 129

Query: 357 LFHAQSLKHFTLS-SDLHAPCR-----TPKTPWDFPALTSLYLNAITL-CDDNNERS-LD 512
            F + +L    L+  DL  P            ++ PALT+LYL  ++  C+D+++ S +D
Sbjct: 130 FFSSHTLTSLNLTGKDLMVPSGWYQIFPSSHSFNLPALTTLYLKHLSFSCNDDDDGSVVD 189

Query: 513 LFSKCVNLKNLTLERFIVKAVEVFDIISPRLSNLTLVHVSCSKVINL 653
            FS    L  L ++R +++             N   + +SC+K++NL
Sbjct: 190 PFSTFNMLNTLIIDRCVLR------------GNAQNLRISCTKLLNL 224


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