BLASTX nr result

ID: Atractylodes21_contig00032074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032074
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    89   5e-16
ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    86   2e-15
ref|XP_003598921.1| F-box family-1 [Medicago truncatula] gi|3554...    86   2e-15
ref|XP_003606020.1| F-box family protein [Medicago truncatula] g...    86   4e-15
ref|XP_003624505.1| F-box family protein [Medicago truncatula] g...    84   2e-14

>ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 450

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/108 (40%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
 Frame = +3

Query: 3   RLSSLPEELIHKILSCLDIKSSVQTCLLSPRWKFVWTSMPCLNFFTQDFDSLPKFAKFVK 182
           RLS +P+ +IH ILS ++ K ++QTC+LS RW+++W S+PCLNF ++ F  L  F KFV 
Sbjct: 57  RLSDMPDCIIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLNFSSKSFMRLVDFKKFVL 116

Query: 183 HFLSHRNHQTEVSSVKLYFHG---AASQVFVRNIANYAFSHNVQELTV 317
             L+HR+  + V  +  Y  G   A  Q  +  +  YA SH V+E+ +
Sbjct: 117 WVLNHRD-SSHVKLLVYYRFGVDYATDQGLLNKVIEYAASHGVEEIKI 163


>ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 449

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
 Frame = +3

Query: 3   RLSSLPEELIHKILSCLDIKSSVQTCLLSPRWKFVWTSMPCLNFFTQDFDSLPKFAKFVK 182
           RLS +P+ LIH ILS ++ K ++QTC+LS RW+++W S+PCL+F ++ F  L  F KFV 
Sbjct: 57  RLSDMPDCLIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLSFSSKSFMRLVNFKKFVL 116

Query: 183 HFLSHRNHQTEVSSVKLYFHG---AASQVFVRNIANYAFSHNVQELTV 317
             L+HR+  + V  +  Y  G      Q  +  +  YA SH V+E+ +
Sbjct: 117 WVLNHRD-SSHVKLLVYYRFGVDYTTDQGLLNKVIEYAASHGVEEIKI 163


>ref|XP_003598921.1| F-box family-1 [Medicago truncatula] gi|355487969|gb|AES69172.1|
           F-box family-1 [Medicago truncatula]
          Length = 384

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/103 (43%), Positives = 59/103 (57%)
 Frame = +3

Query: 3   RLSSLPEELIHKILSCLDIKSSVQTCLLSPRWKFVWTSMPCLNFFTQDFDSLPKFAKFVK 182
           R+S LP+ LI  ILS L +K +VQT +LS RWK +W  +P L   +  F +L  F KFV 
Sbjct: 16  RISDLPDGLILHILSSLKVKQTVQTSILSKRWKNLWKHLPTLTLTSSHFKTLKAFTKFVT 75

Query: 183 HFLSHRNHQTEVSSVKLYFHGAASQVFVRNIANYAFSHNVQEL 311
             LS RN  T + ++K  ++G         I NYA SHNV EL
Sbjct: 76  PLLSLRNVPTSLHTLKFIYNGTIDPRLFEKILNYAVSHNVNEL 118


>ref|XP_003606020.1| F-box family protein [Medicago truncatula]
           gi|357476013|ref|XP_003608292.1| F-box family protein
           [Medicago truncatula] gi|355507075|gb|AES88217.1| F-box
           family protein [Medicago truncatula]
           gi|355509347|gb|AES90489.1| F-box family protein
           [Medicago truncatula]
          Length = 489

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/104 (42%), Positives = 60/104 (57%)
 Frame = +3

Query: 6   LSSLPEELIHKILSCLDIKSSVQTCLLSPRWKFVWTSMPCLNFFTQDFDSLPKFAKFVKH 185
           LS LP+ +I  ILS L+ K +V+TC+LS RWK VW  +P L   + DF +   F KFV  
Sbjct: 31  LSDLPDCVILHILSFLNAKEAVRTCILSNRWKNVWKCVPTLVLHSSDFSTFKNFTKFVSK 90

Query: 186 FLSHRNHQTEVSSVKLYFHGAASQVFVRNIANYAFSHNVQELTV 317
            LSHR+    +  +     G+     ++ I NYAFSHNVQ L +
Sbjct: 91  ILSHRDGTIALQELDFERVGSIEPHLLKRIVNYAFSHNVQRLGI 134


>ref|XP_003624505.1| F-box family protein [Medicago truncatula]
           gi|355499520|gb|AES80723.1| F-box family protein
           [Medicago truncatula]
          Length = 357

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/105 (41%), Positives = 61/105 (58%)
 Frame = +3

Query: 3   RLSSLPEELIHKILSCLDIKSSVQTCLLSPRWKFVWTSMPCLNFFTQDFDSLPKFAKFVK 182
           RLS L + ++  ILS L+ K +VQTC+LS RWK +W  +P L   + DF ++ +FAKFV 
Sbjct: 18  RLSDLSDCVLLHILSSLNTKHAVQTCILSTRWKNLWKRLPSLALRSSDFRNVKRFAKFVS 77

Query: 183 HFLSHRNHQTEVSSVKLYFHGAASQVFVRNIANYAFSHNVQELTV 317
             LS RN  T + +V            ++ I  YA SHNVQ+L V
Sbjct: 78  RVLSLRNDSTSLHTVDFCRTAIVEPYLLKKIVKYAVSHNVQQLDV 122


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