BLASTX nr result

ID: Atractylodes21_contig00032028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032028
         (180 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC70114.1| hypothetical protein OsI_00773 [Oryza sativa Indi...    69   3e-10
ref|NP_001042304.1| Os01g0198000 [Oryza sativa Japonica Group] g...    67   1e-09
sp|Q5QMN4.2|RDR4_ORYSJ RecName: Full=Probable RNA-dependent RNA ...    67   1e-09
gb|EEE54053.1| hypothetical protein OsJ_00746 [Oryza sativa Japo...    67   1e-09
ref|XP_002455002.1| hypothetical protein SORBIDRAFT_03g002800 [S...    67   1e-09

>gb|EEC70114.1| hypothetical protein OsI_00773 [Oryza sativa Indica Group]
          Length = 1172

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 29/58 (50%), Positives = 42/58 (72%)
 Frame = -3

Query: 178  QMLYEGEDFATSSRKIEDIYNEALAIYHTSYDHARSFADVKKCGFAWKVAGEALCSFH 5
            Q+LY   +F  + R ++D+++EA AIY  +Y+ ARS  +V +CGFAWKVAG ALC F+
Sbjct: 1088 QLLYGASEFEETPRDLDDVFSEACAIYQIAYEKARSANNVARCGFAWKVAGRALCHFY 1145


>ref|NP_001042304.1| Os01g0198000 [Oryza sativa Japonica Group]
           gi|56201772|dbj|BAD73222.1| RNA-dependent RNA polymerase
           -like [Oryza sativa Japonica Group]
           gi|56201879|dbj|BAD73329.1| RNA-dependent RNA polymerase
           -like [Oryza sativa Japonica Group]
           gi|113531835|dbj|BAF04218.1| Os01g0198000 [Oryza sativa
           Japonica Group] gi|215693837|dbj|BAG89036.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 582

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/57 (49%), Positives = 41/57 (71%)
 Frame = -3

Query: 175 MLYEGEDFATSSRKIEDIYNEALAIYHTSYDHARSFADVKKCGFAWKVAGEALCSFH 5
           +LY   +F  + R ++D+++EA AIY  +Y+ ARS  +V +CGFAWKVAG ALC F+
Sbjct: 499 LLYGASEFEETPRDLDDVFSEACAIYQIAYEKARSANNVARCGFAWKVAGRALCHFY 555


>sp|Q5QMN4.2|RDR4_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 4; Short=OsRDR4
          Length = 1183

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/57 (49%), Positives = 41/57 (71%)
 Frame = -3

Query: 175  MLYEGEDFATSSRKIEDIYNEALAIYHTSYDHARSFADVKKCGFAWKVAGEALCSFH 5
            +LY   +F  + R ++D+++EA AIY  +Y+ ARS  +V +CGFAWKVAG ALC F+
Sbjct: 1100 LLYGASEFEETPRDLDDVFSEACAIYQIAYEKARSANNVARCGFAWKVAGRALCHFY 1156


>gb|EEE54053.1| hypothetical protein OsJ_00746 [Oryza sativa Japonica Group]
          Length = 1148

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/57 (49%), Positives = 41/57 (71%)
 Frame = -3

Query: 175  MLYEGEDFATSSRKIEDIYNEALAIYHTSYDHARSFADVKKCGFAWKVAGEALCSFH 5
            +LY   +F  + R ++D+++EA AIY  +Y+ ARS  +V +CGFAWKVAG ALC F+
Sbjct: 1065 LLYGASEFEETPRDLDDVFSEACAIYQIAYEKARSANNVARCGFAWKVAGRALCHFY 1121


>ref|XP_002455002.1| hypothetical protein SORBIDRAFT_03g002800 [Sorghum bicolor]
            gi|241926977|gb|EES00122.1| hypothetical protein
            SORBIDRAFT_03g002800 [Sorghum bicolor]
          Length = 1127

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = -3

Query: 172  LYEGEDFATSSRKIEDIYNEALAIYHTSYDHARSFADVKKCGFAWKVAGEALCSFH 5
            LYE E+F  S R+  D+ NEA A+Y   Y++A S  D+ KCGFAWKVAG ALC  +
Sbjct: 1047 LYEAEEFEQSPREQLDLLNEACAVYQVVYEYAMSRNDIAKCGFAWKVAGRALCRLY 1102


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