BLASTX nr result

ID: Atractylodes21_contig00032004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032004
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [...    74   1e-11
ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...    73   2e-11
ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...    69   5e-10
ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...    64   1e-08

>ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
           gi|223538012|gb|EEF39625.1| E3 ubiquitin protein ligase
           upl2, putative [Ricinus communis]
          Length = 3691

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 7/82 (8%)
 Frame = -3

Query: 226 LIEILKAIEKLGYGPKAASSTMDAPTCVASVPMETDAEDNG-------QSSKNNTSEKLP 68
           +IEIL AI K+G G  A+ S+ D P+C   VPMETDAE+ G       +S++ ++SE L 
Sbjct: 674 VIEILNAILKIGSGVDASCSSSDPPSCSTPVPMETDAEERGSAPSDVKESTRMDSSEHLS 733

Query: 67  ESSADTSLLNVESFLPDCVNNA 2
           + S D S++++ESFLPDCV+NA
Sbjct: 734 DLS-DASIVSIESFLPDCVSNA 754


>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 7/82 (8%)
 Frame = -3

Query: 226  LIEILKAIEKLGYGPKAASSTMDAPTCVASVPMETDAEDNG-------QSSKNNTSEKLP 68
            LIEIL AI K+G G ++  S+ D+      +PMETDAED         +SSK  +SE+  
Sbjct: 1036 LIEILNAISKIGSGTESPPSSSDSMCPSTPIPMETDAEDRNLVASDDKESSKMESSEQAM 1095

Query: 67   ESSADTSLLNVESFLPDCVNNA 2
            E S+D SL N+ESFLP+C++NA
Sbjct: 1096 EPSSDASLANIESFLPECISNA 1117


>ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3739

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
 Frame = -3

Query: 226 LIEILKAIEKLGYGPKAASSTMDAPTCVASVPMETDAED-------NGQSSKNNTSEKLP 68
           L+EIL+AI K+G    ++S + D P    SVPME D ED       N +SS  N +E++ 
Sbjct: 674 LVEILEAISKIGSAVDSSSLSPD-PCSSTSVPMEMDGEDKNLILPNNKESSNANDTEQIT 732

Query: 67  ESSADTSLLNVESFLPDCVNN 5
           E S D  ++NVESFLPDCVNN
Sbjct: 733 EPSHDVPIVNVESFLPDCVNN 753


>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
           predicted protein [Populus trichocarpa]
          Length = 3728

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
 Frame = -3

Query: 226 LIEILKAIEKLGYGPKAASSTMDAPTCVASVPMETDAE-------DNGQSSKNNTSEKLP 68
           +IEIL AI K+G G  A+ S  D P+C A VPMETDAE       D+ +S +  T E+  
Sbjct: 674 VIEILNAISKIGSGVDASYSPTD-PSCSAPVPMETDAEERSPVLSDDRESFRMETLEQAT 732

Query: 67  ESSADTSLLNVESFLPDCVNN 5
           E S+D S+ NVES  P+C++N
Sbjct: 733 EQSSDASVANVESLFPECLSN 753


>ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3713

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
 Frame = -3

Query: 226 LIEILKAIEKLGYGPKAASSTMDAPTCVASVPMETDAED-------NGQSSKNNTSEKLP 68
           L+EIL+ I K+G    ++S + D P    SVPME D ED       N +SSK + +E+  
Sbjct: 674 LVEILETISKIGSAVDSSSLSPD-PCSSTSVPMEMDGEDKSLILPNNKESSKADDTEQTT 732

Query: 67  ESSADTSLLNVESFLPDCVNN 5
           E S D  ++NVE FLPDCVNN
Sbjct: 733 EPSPDVPIVNVEPFLPDCVNN 753


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