BLASTX nr result

ID: Atractylodes21_contig00031993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031993
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268669.2| PREDICTED: uncharacterized protein LOC100256...    55   7e-10
ref|XP_002438456.1| hypothetical protein SORBIDRAFT_10g020014 [S...    44   5e-09
ref|XP_002463949.1| hypothetical protein SORBIDRAFT_01g009436 [S...    41   6e-08
emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]    46   9e-08
gb|ABA98111.1| retrotransposon protein, putative, Ty3-gypsy subc...    43   3e-07

>ref|XP_002268669.2| PREDICTED: uncharacterized protein LOC100256661 [Vitis vinifera]
          Length = 1855

 Score = 55.1 bits (131), Expect(2) = 7e-10
 Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 15/73 (20%)
 Frame = +3

Query: 99   KTLVRRPFSHYEFFVMPFGL--------------LL*HRLYAKCKKCEFGQHRIGYLGNF 236
            KT  R  + HYEF +MPFGL              L   +LYAK KKCEF   RI +LG+ 
Sbjct: 1686 KTAFRTRYGHYEFLIMPFGLTNEPTAFMDLMNRTLRDKQLYAKLKKCEFWLDRISFLGHV 1745

Query: 237  ITG-GMEMDPSKV 272
            ++  G+ +DP KV
Sbjct: 1746 VSNDGISVDPGKV 1758



 Score = 33.1 bits (74), Expect(2) = 7e-10
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +2

Query: 8    IDELLDELYGQRCF*SLILKYR*HQIKMRVEDIGKTSFQ 124
            ID+L D+L G   F  + L    HQ+++R ED+ KT+F+
Sbjct: 1652 IDDLFDQLQGACMFSKIDLPSGYHQLRVRGEDVPKTAFR 1690


>ref|XP_002438456.1| hypothetical protein SORBIDRAFT_10g020014 [Sorghum bicolor]
           gi|241916679|gb|EER89823.1| hypothetical protein
           SORBIDRAFT_10g020014 [Sorghum bicolor]
          Length = 1414

 Score = 44.3 bits (103), Expect(2) = 5e-09
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = +2

Query: 5   VIDELLDELYGQRCF*SLILKYR*HQIKMRVEDIGKTSFQ 124
           V+DELLDEL+G R F  L L+   +Q++MR EDI KT+F+
Sbjct: 545 VVDELLDELHGARFFSKLDLRSGYYQVRMRPEDIHKTAFR 584



 Score = 40.8 bits (94), Expect(2) = 5e-09
 Identities = 27/63 (42%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = +3

Query: 99  KTLVRRPFSHYEFFVMPFGL----LL*HRLYAKCKKCEFGQHRIGYLGNFIT-GGMEMDP 263
           KT  R     YEF VMPFGL         L     KCEFG   + YLG+ I+  G+ MD 
Sbjct: 580 KTAFRTHDGLYEFLVMPFGLCNAPATFQALMNDRSKCEFGVSSVAYLGHTISAAGVAMDS 639

Query: 264 SKV 272
           +KV
Sbjct: 640 AKV 642


>ref|XP_002463949.1| hypothetical protein SORBIDRAFT_01g009436 [Sorghum bicolor]
           gi|241917803|gb|EER90947.1| hypothetical protein
           SORBIDRAFT_01g009436 [Sorghum bicolor]
          Length = 1450

 Score = 41.2 bits (95), Expect(2) = 6e-08
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = +2

Query: 5   VIDELLDELYGQRCF*SLILKYR*HQIKMRVEDIGKTSFQ 124
           V+DELLDEL+G R F  L L+   HQ++M   D+ KT+F+
Sbjct: 655 VVDELLDELHGARFFTKLDLRSGYHQVRMLPADVHKTAFR 694



 Score = 40.4 bits (93), Expect(2) = 6e-08
 Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
 Frame = +3

Query: 99  KTLVRRPFSHYEFFVMPFGLLL*HRLYAKC----------KKCEFGQHRIGYLGNFITG- 245
           KT  R     YEF VMPFGL      +             +KC FG+  + YLG+ I+  
Sbjct: 690 KTAFRTHDGLYEFLVMPFGLCNAPATFQALMNDVLRPFLRRKCAFGEVTVAYLGHVISAE 749

Query: 246 GMEMDPSKV 272
           G+ MDP+KV
Sbjct: 750 GVAMDPTKV 758


>emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]
          Length = 1797

 Score = 46.2 bits (108), Expect(2) = 9e-08
 Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 29/87 (33%)
 Frame = +3

Query: 99   KTLVRRPFSHYEFFVMPFGL----------------------------LL*HRLYAKCKK 194
            KT  R  + HYEF VMPFGL                            L   +LYAK KK
Sbjct: 1048 KTAFRTRYEHYEFLVMPFGLTNAPIAFMDLMNRSREEHERHLSIVLQTLRDKQLYAKLKK 1107

Query: 195  CEFGQHRIGYLGNFIT-GGMEMDPSKV 272
            CEF   ++ +LG+ +T  G+ +D  K+
Sbjct: 1108 CEFWLDKVSFLGHVVTKDGISVDSGKI 1134



 Score = 34.7 bits (78), Expect(2) = 9e-08
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = +2

Query: 8    IDELLDELYGQRCF*SLILKYR*HQIKMRVEDIGKTSFQ 124
            ID+L D+L G   F  + L+   HQ+++R ED+ KT+F+
Sbjct: 1014 IDDLFDQLQGACVFSKIDLRSGYHQLRVRSEDVPKTAFR 1052


>gb|ABA98111.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1407

 Score = 42.7 bits (99), Expect(2) = 3e-07
 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 26/84 (30%)
 Frame = +3

Query: 99  KTLVRRPFSHYEFFVMPFGL-------------------------LL*HRLYAKCKKCEF 203
           KT     +  YEF VM FGL                         L  H+LYAK  KCEF
Sbjct: 649 KTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFVVKLRKHKLYAKFSKCEF 708

Query: 204 GQHRIGYLGNFIT-GGMEMDPSKV 272
               + +LG+ I+ GG+ +DP+KV
Sbjct: 709 WLKEVAFLGHVISAGGVAVDPAKV 732



 Score = 36.2 bits (82), Expect(2) = 3e-07
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +2

Query: 8   IDELLDELYGQRCF*SLILKYR*HQIKMRVEDIGKTSF 121
           ID+L D+L G + F  + L+   HQ+ +R EDI KT+F
Sbjct: 615 IDDLFDQLKGAKVFSKIDLRSGYHQLNIRTEDIPKTAF 652


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