BLASTX nr result

ID: Atractylodes21_contig00031983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031983
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36837.3| unnamed protein product [Vitis vinifera]              559   e-157
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   559   e-157
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   558   e-156
ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2...   547   e-153
ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2...   543   e-152

>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  559 bits (1440), Expect = e-157
 Identities = 286/338 (84%), Positives = 306/338 (90%), Gaps = 1/338 (0%)
 Frame = +2

Query: 143  DGVASSVITSPSIKPINKSAVHRICSGQVILDLPSAVKELVENSLDAGATSIEVALKEYG 322
            +G A S   SP+I+ INK AVHRICSGQVILDL SAVKELVENSLDAGATSIE+ALKEYG
Sbjct: 2    EGAAQS--ESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYG 59

Query: 323  EESFQVIDNGCGISPNNFKVLALKHHTSKLTDFPDLQSLTTFGFRGEALSSLCNLGELTV 502
            +E FQVIDNGCGISPNNFKVLALKHHTSKL DFPDLQSLTTFGFRGEALSSLC LG LTV
Sbjct: 60   QEWFQVIDNGCGISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALGNLTV 119

Query: 503  ETRAKSEQVATHLTFDHSGLLTDERKTARQVGTTVTVEKLFSNLPVRSKEFHRNIRKEYG 682
            ETR K+E VATHLTFDHSGLL DE+KTARQ+GTTVTV+KLFSNLPVRSKEF RNIRKEYG
Sbjct: 120  ETRTKNESVATHLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYG 179

Query: 683  KLITLLNAYALTAKGVRLVCTNTAGKN-KSVVLKTQGSGSLKDNIITVFGMNTFTCLEPM 859
            KLI+LL+AYAL A GVRLVCTNT GKN KS+VLKTQGSGSLKDNIITVFGMNTF CLEP+
Sbjct: 180  KLISLLSAYALIAGGVRLVCTNTTGKNVKSMVLKTQGSGSLKDNIITVFGMNTFNCLEPL 239

Query: 860  SLFISDDCKVDGFLSKSGNGSGRYLGDRQYFFVNGRPVDMPKVSKLVNELYRCANSKQYP 1039
            ++ +SD  KVDGF+SKSG GSGR LGDRQ+FFVNGRPVDMPKV KLVNELY+ ANS+QYP
Sbjct: 240  NICLSDSSKVDGFVSKSGYGSGRTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSRQYP 299

Query: 1040 IAIMNFVVPTRVCDVNVTPDKRKIFFSDEGSILQSLRE 1153
            IAIMNF VPTR  DVNVTPDKRKIFFSDEGSIL SLRE
Sbjct: 300  IAIMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLRE 337


>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  559 bits (1440), Expect = e-157
 Identities = 286/338 (84%), Positives = 306/338 (90%), Gaps = 1/338 (0%)
 Frame = +2

Query: 143  DGVASSVITSPSIKPINKSAVHRICSGQVILDLPSAVKELVENSLDAGATSIEVALKEYG 322
            +G A S   SP+I+ INK AVHRICSGQVILDL SAVKELVENSLDAGATSIE+ALKEYG
Sbjct: 2    EGAAQS--ESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYG 59

Query: 323  EESFQVIDNGCGISPNNFKVLALKHHTSKLTDFPDLQSLTTFGFRGEALSSLCNLGELTV 502
            +E FQVIDNGCGISPNNFKVLALKHHTSKL DFPDLQSLTTFGFRGEALSSLC LG LTV
Sbjct: 60   QEWFQVIDNGCGISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALGNLTV 119

Query: 503  ETRAKSEQVATHLTFDHSGLLTDERKTARQVGTTVTVEKLFSNLPVRSKEFHRNIRKEYG 682
            ETR K+E VATHLTFDHSGLL DE+KTARQ+GTTVTV+KLFSNLPVRSKEF RNIRKEYG
Sbjct: 120  ETRTKNESVATHLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYG 179

Query: 683  KLITLLNAYALTAKGVRLVCTNTAGKN-KSVVLKTQGSGSLKDNIITVFGMNTFTCLEPM 859
            KLI+LL+AYAL A GVRLVCTNT GKN KS+VLKTQGSGSLKDNIITVFGMNTF CLEP+
Sbjct: 180  KLISLLSAYALIAGGVRLVCTNTTGKNVKSMVLKTQGSGSLKDNIITVFGMNTFNCLEPL 239

Query: 860  SLFISDDCKVDGFLSKSGNGSGRYLGDRQYFFVNGRPVDMPKVSKLVNELYRCANSKQYP 1039
            ++ +SD  KVDGF+SKSG GSGR LGDRQ+FFVNGRPVDMPKV KLVNELY+ ANS+QYP
Sbjct: 240  NICLSDSSKVDGFVSKSGYGSGRTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSRQYP 299

Query: 1040 IAIMNFVVPTRVCDVNVTPDKRKIFFSDEGSILQSLRE 1153
            IAIMNF VPTR  DVNVTPDKRKIFFSDEGSIL SLRE
Sbjct: 300  IAIMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLRE 337


>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
            gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
            pms2, putative [Ricinus communis]
          Length = 924

 Score =  558 bits (1437), Expect = e-156
 Identities = 279/332 (84%), Positives = 305/332 (91%), Gaps = 1/332 (0%)
 Frame = +2

Query: 161  VITSPSIKPINKSAVHRICSGQVILDLPSAVKELVENSLDAGATSIEVALKEYGEESFQV 340
            +  SP IKPINK  VHRIC+GQVILDL SAVKELVENSLDAGATSIE++LK+YGE+SFQV
Sbjct: 3    ISNSPIIKPINKGVVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEDSFQV 62

Query: 341  IDNGCGISPNNFKVLALKHHTSKLTDFPDLQSLTTFGFRGEALSSLCNLGELTVETRAKS 520
            IDNGCG+SPNNFKVLALKHHTSKL DFPDLQSLTTFGFRGEALSSLC LGELTVETR K+
Sbjct: 63   IDNGCGVSPNNFKVLALKHHTSKLADFPDLQSLTTFGFRGEALSSLCALGELTVETRTKN 122

Query: 521  EQVATHLTFDHSGLLTDERKTARQVGTTVTVEKLFSNLPVRSKEFHRNIRKEYGKLITLL 700
            E VATHL++D SGLLT E+KTARQ+GTTVTV+KLFSNLPVRSKEF RNIRKEYGKLI+LL
Sbjct: 123  ESVATHLSYDRSGLLTAEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKLISLL 182

Query: 701  NAYALTAKGVRLVCTNTAGKN-KSVVLKTQGSGSLKDNIITVFGMNTFTCLEPMSLFISD 877
            NAYAL AKGVRL+CTNT G+N K VVLKTQG+ SLKDNIITVFGM+TF+CLEP+S+ ISD
Sbjct: 183  NAYALIAKGVRLLCTNTTGRNAKIVVLKTQGTDSLKDNIITVFGMSTFSCLEPVSICISD 242

Query: 878  DCKVDGFLSKSGNGSGRYLGDRQYFFVNGRPVDMPKVSKLVNELYRCANSKQYPIAIMNF 1057
             CKVDGFLSK G GSGR LGDRQY+FVNGRPVDMPKV+KLVNELYR ANS+QYPIAIMNF
Sbjct: 243  CCKVDGFLSKPGQGSGRNLGDRQYYFVNGRPVDMPKVTKLVNELYRGANSRQYPIAIMNF 302

Query: 1058 VVPTRVCDVNVTPDKRKIFFSDEGSILQSLRE 1153
            +VPTR CDVNVTPDKRKIFFSDE SIL +LRE
Sbjct: 303  IVPTRACDVNVTPDKRKIFFSDETSILHALRE 334


>ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1|
            predicted protein [Populus trichocarpa]
          Length = 915

 Score =  547 bits (1409), Expect = e-153
 Identities = 279/334 (83%), Positives = 305/334 (91%), Gaps = 1/334 (0%)
 Frame = +2

Query: 155  SSVITSPSIKPINKSAVHRICSGQVILDLPSAVKELVENSLDAGATSIEVALKEYGEESF 334
            SS IT   I+PINK+AVHRIC+GQVILDL SAVKELVENSLDAGATSIE++LK+YG ESF
Sbjct: 3    SSAIT---IRPINKAAVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGLESF 59

Query: 335  QVIDNGCGISPNNFKVLALKHHTSKLTDFPDLQSLTTFGFRGEALSSLCNLGELTVETRA 514
            QVIDNGCG+SPNNFKVLALKHHTSKL DF DLQSLTTFGFRGEALSSLC LG+LTVETR 
Sbjct: 60   QVIDNGCGVSPNNFKVLALKHHTSKLGDFHDLQSLTTFGFRGEALSSLCVLGDLTVETRT 119

Query: 515  KSEQVATHLTFDHSGLLTDERKTARQVGTTVTVEKLFSNLPVRSKEFHRNIRKEYGKLIT 694
            K+E VATHLTF+HSGLLT ERKTARQVGTTVTV+KLFS+LPVRSKEF RNIRKEYGKLI+
Sbjct: 120  KNEPVATHLTFNHSGLLTAERKTARQVGTTVTVKKLFSSLPVRSKEFSRNIRKEYGKLIS 179

Query: 695  LLNAYALTAKGVRLVCTNTAGKN-KSVVLKTQGSGSLKDNIITVFGMNTFTCLEPMSLFI 871
            LLNAYAL +KGVR+VC+NT GKN KSVVLKTQGS SLKDNIITVFG+NTF+CLEP+ + I
Sbjct: 180  LLNAYALISKGVRIVCSNTTGKNAKSVVLKTQGSDSLKDNIITVFGVNTFSCLEPVDIDI 239

Query: 872  SDDCKVDGFLSKSGNGSGRYLGDRQYFFVNGRPVDMPKVSKLVNELYRCANSKQYPIAIM 1051
            S  CKV+GFLSKSG GSGR LGDRQY+FVNGRPVDMPKVSKLVNELY+ ANS+QYPIAIM
Sbjct: 240  SGSCKVEGFLSKSGQGSGRNLGDRQYYFVNGRPVDMPKVSKLVNELYKGANSRQYPIAIM 299

Query: 1052 NFVVPTRVCDVNVTPDKRKIFFSDEGSILQSLRE 1153
            NF +PT  CDVNVTPDKRKIFFSDE SIL +LRE
Sbjct: 300  NFTIPTTACDVNVTPDKRKIFFSDESSILLALRE 333


>ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus]
            gi|449498483|ref|XP_004160549.1| PREDICTED: mismatch
            repair endonuclease PMS2-like [Cucumis sativus]
          Length = 921

 Score =  543 bits (1399), Expect = e-152
 Identities = 269/331 (81%), Positives = 301/331 (90%), Gaps = 1/331 (0%)
 Frame = +2

Query: 164  ITSPSIKPINKSAVHRICSGQVILDLPSAVKELVENSLDAGATSIEVALKEYGEESFQVI 343
            + SP+IKPINK  VHRIC+GQVILDL SAVKELVENSLDAGATSIE++LK+YGEE FQVI
Sbjct: 7    VDSPAIKPINKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEEWFQVI 66

Query: 344  DNGCGISPNNFKVLALKHHTSKLTDFPDLQSLTTFGFRGEALSSLCNLGELTVETRAKSE 523
            DNG GISP NF+VLALKHHTSKL+DFPDLQSLTT+GFRGEALSSLC+LG LTVET+ K+E
Sbjct: 67   DNGSGISPTNFRVLALKHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGTLTVETKTKNE 126

Query: 524  QVATHLTFDHSGLLTDERKTARQVGTTVTVEKLFSNLPVRSKEFHRNIRKEYGKLITLLN 703
             VATHLTFDHSGLL  E+KTARQVGTTV V+KLFSNLPVRSKEF RNIRKEYGKLI+LLN
Sbjct: 127  SVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLN 186

Query: 704  AYALTAKGVRLVCTNTAGKN-KSVVLKTQGSGSLKDNIITVFGMNTFTCLEPMSLFISDD 880
            AYA+ A+GVR +CTN+AGKN KSVV KTQGSGS+KDNIITVFGMNTF CLE + + +SDD
Sbjct: 187  AYAVIARGVRFLCTNSAGKNAKSVVFKTQGSGSIKDNIITVFGMNTFNCLESVCILLSDD 246

Query: 881  CKVDGFLSKSGNGSGRYLGDRQYFFVNGRPVDMPKVSKLVNELYRCANSKQYPIAIMNFV 1060
            CKVDGF+SKSG GSGR LGDRQ+FFVN RPVDMPKVSKLVNELY+ ANS+QYPIAI+NF 
Sbjct: 247  CKVDGFVSKSGQGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAILNFT 306

Query: 1061 VPTRVCDVNVTPDKRKIFFSDEGSILQSLRE 1153
            +P++ CDVNVTPDKRKIFFSDE  ILQ+LRE
Sbjct: 307  LPSKACDVNVTPDKRKIFFSDETHILQTLRE 337


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