BLASTX nr result

ID: Atractylodes21_contig00031982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031982
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327645.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
emb|CAN71843.1| hypothetical protein VITISV_036263 [Vitis vinifera]   120   1e-25
ref|XP_004146154.1| PREDICTED: F-box protein At4g35930-like [Cuc...   114   1e-23
ref|XP_002531155.1| conserved hypothetical protein [Ricinus comm...   112   2e-23
ref|XP_002869050.1| predicted protein [Arabidopsis lyrata subsp....   100   9e-20

>ref|XP_002327645.1| predicted protein [Populus trichocarpa] gi|222836730|gb|EEE75123.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score =  124 bits (311), Expect = 8e-27
 Identities = 75/148 (50%), Positives = 99/148 (66%), Gaps = 12/148 (8%)
 Frame = -3

Query: 410 KEKMYKTSKQKRR-KHGSNKYLKPGALAQLRNSKASASKSFIDTGKKKVDIMDAEKTHGG 234
           K+   KT KQKRR +  S++YLKPGALAQL+ SKASA+KS  D GKK+V +   +K    
Sbjct: 7   KDGNLKTPKQKRRLRSSSSRYLKPGALAQLQYSKASAAKSCTDLGKKRVAVFGNKKVGDD 66

Query: 233 --VLFQDKCSNDIPIILSPEKF--RYNP-------VAGPVDLIKENNLQRTPKMPHPEGD 87
             ++ +D+  +  P++LSP     +++P       +  PVDL+K+N+L RTPK P  E  
Sbjct: 67  DELVVEDRAMDKSPLLLSPVGLCKQHHPTIDKSPLMLSPVDLLKQNHLARTPKTPRIED- 125

Query: 86  GSDYESRLESLPMELLVKILCHLYHDQL 3
             D ESRLESLPMELLVKILCHL+HDQL
Sbjct: 126 -CDTESRLESLPMELLVKILCHLHHDQL 152


>emb|CAN71843.1| hypothetical protein VITISV_036263 [Vitis vinifera]
          Length = 463

 Score =  120 bits (301), Expect = 1e-25
 Identities = 70/137 (51%), Positives = 95/137 (69%), Gaps = 1/137 (0%)
 Frame = -3

Query: 410 KEKMYKTSKQKRR-KHGSNKYLKPGALAQLRNSKASASKSFIDTGKKKVDIMDAEKTHGG 234
           KE+  KT KQKRR ++ SNKYL+PGALAQLR SKA A+KS  D  KK+V ++D++K    
Sbjct: 197 KERGMKTPKQKRRQRNSSNKYLRPGALAQLRYSKA-ATKSCTDLVKKQVAVLDSKKADSD 255

Query: 233 VLFQDKCSNDIPIILSPEKFRYNPVAGPVDLIKENNLQRTPKMPHPEGDGSDYESRLESL 54
           +    +  ++   I SPEKF ++PV G    +K+++L  TP+ P    D  + ES+LESL
Sbjct: 256 IALGGEAIDESLPIASPEKFGFSPVIGQ---LKQSSLMGTPRTPRV--DECESESKLESL 310

Query: 53  PMELLVKILCHLYHDQL 3
           PM+LLVKILCHL+HDQL
Sbjct: 311 PMDLLVKILCHLHHDQL 327


>ref|XP_004146154.1| PREDICTED: F-box protein At4g35930-like [Cucumis sativus]
           gi|449524671|ref|XP_004169345.1| PREDICTED: F-box
           protein At4g35930-like [Cucumis sativus]
          Length = 266

 Score =  114 bits (284), Expect = 1e-23
 Identities = 68/132 (51%), Positives = 85/132 (64%), Gaps = 1/132 (0%)
 Frame = -3

Query: 395 KTSKQKRRKHGSN-KYLKPGALAQLRNSKASASKSFIDTGKKKVDIMDAEKTHGGVLFQD 219
           K  K++RR  GS  KYLKPGALA+LR SK S +KS  D G+K+V ++DA KT   V+ +D
Sbjct: 12  KKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLED 71

Query: 218 KCSNDIPIILSPEKFRYNPVAGPVDLIKENNLQRTPKMPHPEGDGSDYESRLESLPMELL 39
           K S+  P++LS           PV L+   N   TPK P  E    + ESRLESLPM+LL
Sbjct: 72  KVSDRSPLMLS-----------PVKLVMHINHIGTPKTPRVE--DCESESRLESLPMDLL 118

Query: 38  VKILCHLYHDQL 3
           VKILCHL+HDQL
Sbjct: 119 VKILCHLHHDQL 130


>ref|XP_002531155.1| conserved hypothetical protein [Ricinus communis]
           gi|223529268|gb|EEF31240.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score =  112 bits (281), Expect = 2e-23
 Identities = 72/140 (51%), Positives = 92/140 (65%), Gaps = 4/140 (2%)
 Frame = -3

Query: 410 KEKMYKTSKQKRR-KHGSNKYLKPGALAQLRNSKAS-ASKSFIDTGKKKVDIMDAEKTHG 237
           KE+  +T KQKRR +  S++YLKPGALAQLR +KAS A+KS  D GKK+V ++  +K  G
Sbjct: 7   KERDSRTPKQKRRLRSSSSRYLKPGALAQLRYNKASTATKSCTDLGKKRVAVLTNKKAEG 66

Query: 236 GVLFQDKCS--NDIPIILSPEKFRYNPVAGPVDLIKENNLQRTPKMPHPEGDGSDYESRL 63
             +  +  S  +  P++LSP           VDL+K + L RTPK P  E   SD  SRL
Sbjct: 67  DDIMIENNSVIDKSPLMLSP-----------VDLLKHSYLVRTPKTPRTEDCESD--SRL 113

Query: 62  ESLPMELLVKILCHLYHDQL 3
           ESLPM+LLVKILCHL+HDQL
Sbjct: 114 ESLPMDLLVKILCHLHHDQL 133


>ref|XP_002869050.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314886|gb|EFH45309.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 301

 Score =  100 bits (250), Expect = 9e-20
 Identities = 65/153 (42%), Positives = 89/153 (58%), Gaps = 22/153 (14%)
 Frame = -3

Query: 395 KTSKQKRRKHGS-NKYLKPGALAQLRNSKASASKSFIDTGKKKVDIMDAEKTHGGVLFQD 219
           KTS +K++  GS NKYLKPGAL QL  SKASA+KS  D GKK+V + D +      +  +
Sbjct: 12  KTSVRKKKLKGSGNKYLKPGALVQLCYSKASAAKSCNDLGKKRVPVFDTKHARNKKMAAE 71

Query: 218 KC-SNDIPIILSP-------------------EKFRYNP-VAGPVDLIKENNLQRTPKMP 102
              S   P++LSP                      + +P +  P+ ++ +N L RTPK  
Sbjct: 72  HLNSPKSPLMLSPVNVVKRSTLVRPMKFDDSNNSCKKSPLMLSPMGIVMQNTLVRTPKT- 130

Query: 101 HPEGDGSDYESRLESLPMELLVKILCHLYHDQL 3
            P+ D  + ES+LESLPM+LLVKI+CHL+HDQL
Sbjct: 131 -PQADPCNSESQLESLPMDLLVKIVCHLHHDQL 162


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