BLASTX nr result

ID: Atractylodes21_contig00031879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031879
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40671.3| unnamed protein product [Vitis vinifera]              171   2e-40
ref|XP_002264268.1| PREDICTED: uncharacterized protein LOC100266...   171   2e-40
dbj|BAH20245.1| AT5G16780 [Arabidopsis thaliana]                      166   8e-39
ref|NP_197180.1| U4/U6.U5 tri-snRNP-associated protein 1 [Arabid...   166   8e-39
ref|XP_004141556.1| PREDICTED: uncharacterized protein LOC101207...   165   1e-38

>emb|CBI40671.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score =  171 bits (432), Expect = 2e-40
 Identities = 85/112 (75%), Positives = 98/112 (87%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1    HGKGPGKKKQEKRMRRYQEELKVKQMQNSDTPSLSVERIREALSKMKTPYLVLSGHVKPG 180
            HGKGPGK KQEKRM++YQEELK+KQM+NSDTPS SVER+REA +++KTPYLVLSGHVKPG
Sbjct: 833  HGKGPGKMKQEKRMKQYQEELKLKQMKNSDTPSQSVERMREAQARLKTPYLVLSGHVKPG 892

Query: 181  QTSDPRSGFATME-DSPGSLTPMLGNREVEHFWGRKRKSEPTKEA*NLKQKT 333
            QTSDPRSGFAT+E D PGSLTPMLG+R+VEHF G KRK+EP+      K KT
Sbjct: 893  QTSDPRSGFATVEKDVPGSLTPMLGDRKVEHFLGIKRKAEPSNMGPPKKPKT 944


>ref|XP_002264268.1| PREDICTED: uncharacterized protein LOC100266959 [Vitis vinifera]
          Length = 902

 Score =  171 bits (432), Expect = 2e-40
 Identities = 85/112 (75%), Positives = 98/112 (87%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1    HGKGPGKKKQEKRMRRYQEELKVKQMQNSDTPSLSVERIREALSKMKTPYLVLSGHVKPG 180
            HGKGPGK KQEKRM++YQEELK+KQM+NSDTPS SVER+REA +++KTPYLVLSGHVKPG
Sbjct: 791  HGKGPGKMKQEKRMKQYQEELKLKQMKNSDTPSQSVERMREAQARLKTPYLVLSGHVKPG 850

Query: 181  QTSDPRSGFATME-DSPGSLTPMLGNREVEHFWGRKRKSEPTKEA*NLKQKT 333
            QTSDPRSGFAT+E D PGSLTPMLG+R+VEHF G KRK+EP+      K KT
Sbjct: 851  QTSDPRSGFATVEKDVPGSLTPMLGDRKVEHFLGIKRKAEPSNMGPPKKPKT 902


>dbj|BAH20245.1| AT5G16780 [Arabidopsis thaliana]
          Length = 799

 Score =  166 bits (419), Expect = 8e-39
 Identities = 80/101 (79%), Positives = 94/101 (93%), Gaps = 1/101 (0%)
 Frame = +1

Query: 1   HGKGPGKKKQEKRMRRYQEELKVKQMQNSDTPSLSVERIREALSKMKTPYLVLSGHVKPG 180
           HGKGPGK K+EKRM++YQEELK+KQM+NSDTPS SV+R+REA +++KTPYLVLSGHVKPG
Sbjct: 687 HGKGPGKMKEEKRMKQYQEELKLKQMKNSDTPSQSVQRMREAQAQLKTPYLVLSGHVKPG 746

Query: 181 QTSDPRSGFATME-DSPGSLTPMLGNREVEHFWGRKRKSEP 300
           QTSDP+SGFAT+E D PGSLTPMLG+R+VEHF G KRKSEP
Sbjct: 747 QTSDPQSGFATVEKDVPGSLTPMLGDRKVEHFLGIKRKSEP 787


>ref|NP_197180.1| U4/U6.U5 tri-snRNP-associated protein 1 [Arabidopsis thaliana]
            gi|9755730|emb|CAC01842.1| putative protein [Arabidopsis
            thaliana] gi|332004954|gb|AED92337.1| U4/U6.U5
            tri-snRNP-associated protein 1 [Arabidopsis thaliana]
          Length = 820

 Score =  166 bits (419), Expect = 8e-39
 Identities = 80/101 (79%), Positives = 94/101 (93%), Gaps = 1/101 (0%)
 Frame = +1

Query: 1    HGKGPGKKKQEKRMRRYQEELKVKQMQNSDTPSLSVERIREALSKMKTPYLVLSGHVKPG 180
            HGKGPGK K+EKRM++YQEELK+KQM+NSDTPS SV+R+REA +++KTPYLVLSGHVKPG
Sbjct: 708  HGKGPGKMKEEKRMKQYQEELKLKQMKNSDTPSQSVQRMREAQAQLKTPYLVLSGHVKPG 767

Query: 181  QTSDPRSGFATME-DSPGSLTPMLGNREVEHFWGRKRKSEP 300
            QTSDP+SGFAT+E D PGSLTPMLG+R+VEHF G KRKSEP
Sbjct: 768  QTSDPQSGFATVEKDVPGSLTPMLGDRKVEHFLGIKRKSEP 808


>ref|XP_004141556.1| PREDICTED: uncharacterized protein LOC101207335 [Cucumis sativus]
            gi|449522278|ref|XP_004168154.1| PREDICTED:
            uncharacterized LOC101207335 [Cucumis sativus]
          Length = 939

 Score =  165 bits (417), Expect = 1e-38
 Identities = 80/100 (80%), Positives = 92/100 (92%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1    HGKGPGKKKQEKRMRRYQEELKVKQMQNSDTPSLSVERIREALSKMKTPYLVLSGHVKPG 180
            HGKGPGK KQEKRM++YQEELK+KQM+N+DTPSLSVER+REA +++KTPYLVLSGHVKPG
Sbjct: 829  HGKGPGKMKQEKRMKQYQEELKLKQMKNADTPSLSVERMREAQAQLKTPYLVLSGHVKPG 888

Query: 181  QTSDPRSGFATME-DSPGSLTPMLGNREVEHFWGRKRKSE 297
            QTSDPRSGFAT+E D PG LTPMLG+R+VEHF G KRK E
Sbjct: 889  QTSDPRSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRKGE 928


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