BLASTX nr result

ID: Atractylodes21_contig00031872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031872
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279153.1| PREDICTED: DNA replication complex GINS prot...   292   7e-77
gb|AFK42443.1| unknown [Medicago truncatula]                          265   1e-68
ref|XP_002274677.2| PREDICTED: DNA replication complex GINS prot...   258   9e-67
ref|XP_003529921.1| PREDICTED: LOW QUALITY PROTEIN: DNA replicat...   249   4e-64
ref|XP_003564787.1| PREDICTED: DNA replication complex GINS prot...   248   9e-64

>ref|XP_002279153.1| PREDICTED: DNA replication complex GINS protein SLD5 [Vitis
           vinifera] gi|296083231|emb|CBI22867.3| unnamed protein
           product [Vitis vinifera]
          Length = 220

 Score =  292 bits (747), Expect = 7e-77
 Identities = 151/221 (68%), Positives = 185/221 (83%)
 Frame = +3

Query: 114 MESGSGEGTDRFSAMDDYETLISTTDADLLKRSWRNEKAAPEILQFESSLIQRSREQIQL 293
           M SGS EG+  F A DDYE+LI+TTD +LLKR+WRNEKAAPEIL F+++L+QRSREQIQL
Sbjct: 1   MASGSEEGSG-FPA-DDYESLIATTDVELLKRAWRNEKAAPEILHFQTALVQRSREQIQL 58

Query: 294 MEETVEEFMKNGEDPLTLSLYQMDIDRTTFLLRSYLRTRLQKIEKFMYHIQKTADLWTRL 473
           MEETVEEF +NG DPLT+SLYQMD+DRT FLLRSYLR RLQKIEK+M+HI KT D+W+RL
Sbjct: 59  MEETVEEFGENGTDPLTVSLYQMDLDRTQFLLRSYLRIRLQKIEKYMFHILKT-DVWSRL 117

Query: 474 SRQEQKFARRSIEDMKQHLEQSVLAKLPDRYKSHLKQSVISEEDDMVAEPKLDAFVICRT 653
           S QEQKFA+R  +DM++HLEQSVL++LPD Y+S LKQSV SEEDDMV EP+LD FV C++
Sbjct: 118 SEQEQKFAKRCTDDMERHLEQSVLSRLPDGYQSILKQSVASEEDDMVPEPRLDTFVFCKS 177

Query: 654 RKFLGSLPVDDSGEEKPLDMYAGDIYALRYKSIKPLIESGQ 776
           +  + +  +DDS E   +D+ A D+Y LRY S+KPLIESGQ
Sbjct: 178 KGSIEAFQLDDSKE--VVDLVADDLYILRYNSVKPLIESGQ 216


>gb|AFK42443.1| unknown [Medicago truncatula]
          Length = 227

 Score =  265 bits (676), Expect = 1e-68
 Identities = 136/226 (60%), Positives = 174/226 (76%), Gaps = 5/226 (2%)
 Frame = +3

Query: 114 MESGSGEGTDRFSAMDDYETLISTTDADLLKRSWRNEKAAPEILQFESSLIQRSREQIQL 293
           M S S EG ++ S  DDY+ LISTTD +LLKR+WRNEKAAPEIL+FES LI R + QI+L
Sbjct: 1   MGSRSAEG-EQSSLADDYDALISTTDVELLKRAWRNEKAAPEILRFESDLINRVKGQIEL 59

Query: 294 MEETVEEFMKNGEDPLTLSLYQMDIDRTTFLLRSYLRTRLQKIEKFMYHIQKTADLWTRL 473
           MEETVEE +  G DPL++SLYQMD+DRT FLLRSYLR R+ KIEK+M+HI+KT +LW RL
Sbjct: 60  MEETVEEKLSVGSDPLSVSLYQMDLDRTLFLLRSYLRIRILKIEKYMFHIRKTQELWNRL 119

Query: 474 SRQEQKFARRSIEDMKQHLEQSVLAKLPDRYKSHLKQSVISEEDDMVAEPKLDAFVICRT 653
           SR E+ F  R  +D+K+HLE SVL+KLP+ Y+S+ +QSVISEEDDMV EP+LD FV+CR+
Sbjct: 120 SRDEKLFTERCTDDLKEHLESSVLSKLPENYQSYERQSVISEEDDMVPEPRLDTFVLCRS 179

Query: 654 RKFLGSL-----PVDDSGEEKPLDMYAGDIYALRYKSIKPLIESGQ 776
           +++L  +     PVDD    K  +M    +Y + YKSIKPL+ESG+
Sbjct: 180 KEYLTGIQLEDGPVDD--RSKLFEMEPDVLYFICYKSIKPLVESGK 223


>ref|XP_002274677.2| PREDICTED: DNA replication complex GINS protein SLD5-like [Vitis
           vinifera]
          Length = 214

 Score =  258 bits (660), Expect = 9e-67
 Identities = 140/221 (63%), Positives = 174/221 (78%)
 Frame = +3

Query: 114 MESGSGEGTDRFSAMDDYETLISTTDADLLKRSWRNEKAAPEILQFESSLIQRSREQIQL 293
           M SGS E +  F A DDYE+LI+TTD +LLKR+W NEKAAPEIL F++      REQIQL
Sbjct: 1   MVSGSEEESG-FPA-DDYESLIATTDVELLKRAWMNEKAAPEILHFQT------REQIQL 52

Query: 294 MEETVEEFMKNGEDPLTLSLYQMDIDRTTFLLRSYLRTRLQKIEKFMYHIQKTADLWTRL 473
           MEETVEEF +NG DPLT+SLYQM++DRT FLLRSYL+ RLQKIEK+M+HI KT D+W+ L
Sbjct: 53  MEETVEEFGENGTDPLTVSLYQMNLDRTQFLLRSYLQIRLQKIEKYMFHILKT-DVWSWL 111

Query: 474 SRQEQKFARRSIEDMKQHLEQSVLAKLPDRYKSHLKQSVISEEDDMVAEPKLDAFVICRT 653
           S QEQKFA+R  +DM++HLEQSVL++LPD Y+S LKQSV SEEDDMV EP+LD FV  ++
Sbjct: 112 SEQEQKFAKRCTDDMERHLEQSVLSRLPDGYQSILKQSVASEEDDMVPEPRLDTFVFYKS 171

Query: 654 RKFLGSLPVDDSGEEKPLDMYAGDIYALRYKSIKPLIESGQ 776
           +  + +  +DDS E   +D+ A D+Y LRY S+ PLIESGQ
Sbjct: 172 KGSIEAFQLDDSKE--VVDLVADDLYILRYNSVNPLIESGQ 210


>ref|XP_003529921.1| PREDICTED: LOW QUALITY PROTEIN: DNA replication complex GINS
           protein SLD5-like [Glycine max]
          Length = 226

 Score =  249 bits (637), Expect = 4e-64
 Identities = 127/222 (57%), Positives = 166/222 (74%), Gaps = 5/222 (2%)
 Frame = +3

Query: 126 SGEGTDRFSAMDDYETLISTTDADLLKRSWRNEKAAPEILQFESSLIQRSREQIQLMEET 305
           S    +  S  DDYE LI+TTDA+LLKR+WRNEKAAPEIL++ES L+ R ++ IQ +EET
Sbjct: 3   SNSAAEGVSMGDDYEALIATTDAELLKRAWRNEKAAPEILRYESDLVSRVKKVIQFLEET 62

Query: 306 VEEFMKNGEDPLTLSLYQMDIDRTTFLLRSYLRTRLQKIEKFMYHIQKTADLWTRLSRQE 485
           VEE    G +PL++SLYQMD+DRT FLLRSYLR R+QKIEKF++HIQKT +LW RLS+ E
Sbjct: 63  VEEKSSGGTNPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKFVFHIQKTEELWNRLSKDE 122

Query: 486 QKFARRSIEDMKQHLEQSVLAKLPDRYKSHLKQSVISEEDDMVAEPKLDAFVICRTRKFL 665
           + FA+    D+KQHL++SVL KLP  YKS L+QS +SEEDDMV EP+LD FV+CR++++L
Sbjct: 123 KDFAKACENDLKQHLDESVLLKLPKDYKSVLRQSSMSEEDDMVPEPQLDTFVLCRSKEYL 182

Query: 666 GSL-----PVDDSGEEKPLDMYAGDIYALRYKSIKPLIESGQ 776
             +     PVDD    K  +M  G ++ + YKSI  L+ESG+
Sbjct: 183 TGIQLEDGPVDD--RSKLFEMEPGVLHFICYKSIXALVESGK 222


>ref|XP_003564787.1| PREDICTED: DNA replication complex GINS protein SLD5-like
           [Brachypodium distachyon]
          Length = 215

 Score =  248 bits (634), Expect = 9e-64
 Identities = 128/211 (60%), Positives = 164/211 (77%), Gaps = 2/211 (0%)
 Frame = +3

Query: 150 SAMDDYETL--ISTTDADLLKRSWRNEKAAPEILQFESSLIQRSREQIQLMEETVEEFMK 323
           S+ DD +T    +TTD +LLKR+WRNEKAAPEIL+F+S L+ R+REQIQL+EET+E+F  
Sbjct: 2   SSWDDEDTASAAATTDVELLKRAWRNEKAAPEILRFDSPLVSRAREQIQLLEETLEDFTD 61

Query: 324 NGEDPLTLSLYQMDIDRTTFLLRSYLRTRLQKIEKFMYHIQKTADLWTRLSRQEQKFARR 503
           NG D L +SLYQMD+DR  FLLRSYLR RLQKIEK+M HI K+ DL +RLS QEQ+FA+ 
Sbjct: 62  NGVDDLVVSLYQMDLDRALFLLRSYLRLRLQKIEKYMIHISKSDDLMSRLSLQEQRFAKS 121

Query: 504 SIEDMKQHLEQSVLAKLPDRYKSHLKQSVISEEDDMVAEPKLDAFVICRTRKFLGSLPVD 683
             E M++HLEQSVL+KLP  Y S  +QS+ S EDDMV EP+LD FV C+T+  +G+  +D
Sbjct: 122 CTEIMEKHLEQSVLSKLPYGYDSVTRQSLSSTEDDMVPEPQLDTFVFCKTKSDVGAFQLD 181

Query: 684 DSGEEKPLDMYAGDIYALRYKSIKPLIESGQ 776
           D GEE  +D+ A D+Y LRYKSIK L+E+G+
Sbjct: 182 DIGEE-IVDLVADDLYVLRYKSIKGLVENGR 211


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