BLASTX nr result

ID: Atractylodes21_contig00031865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031865
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...   189   2e-46
emb|CBI22513.3| unnamed protein product [Vitis vinifera]              189   2e-46
ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta...   176   2e-42
ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|2...   174   9e-42
ref|XP_004159933.1| PREDICTED: DNA repair protein REV1-like [Cuc...   172   2e-41

>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score =  189 bits (481), Expect = 2e-46
 Identities = 86/112 (76%), Positives = 101/112 (90%)
 Frame = +3

Query: 3   SAKPNNQCFLPPEKVNDFLKDLPIKALPGIGRALEEKLRGRHVKTCGELRMISKESLQKD 182
           SAKPN QC++P +KV+D+L  LPIKALPGIG  LEEKLR R V TCG+LRMISKESLQ+D
Sbjct: 548 SAKPNGQCYIPVDKVDDYLHQLPIKALPGIGHVLEEKLRRRKVHTCGQLRMISKESLQRD 607

Query: 183 FGQKTGDMLWNYCRGIDNRLVGMIQESKSVGADVNWGVRFKDLKDSQHFLLS 338
           FG KTGDMLWNYCRG+DNR+VG+IQESKS+GA+VNWGVRF DLKDS+HFL++
Sbjct: 608 FGTKTGDMLWNYCRGVDNRVVGVIQESKSIGAEVNWGVRFNDLKDSRHFLVN 659


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score =  189 bits (481), Expect = 2e-46
 Identities = 86/112 (76%), Positives = 101/112 (90%)
 Frame = +3

Query: 3   SAKPNNQCFLPPEKVNDFLKDLPIKALPGIGRALEEKLRGRHVKTCGELRMISKESLQKD 182
           SAKPN QC++P +KV+D+L  LPIKALPGIG  LEEKLR R V TCG+LRMISKESLQ+D
Sbjct: 526 SAKPNGQCYIPVDKVDDYLHQLPIKALPGIGHVLEEKLRRRKVHTCGQLRMISKESLQRD 585

Query: 183 FGQKTGDMLWNYCRGIDNRLVGMIQESKSVGADVNWGVRFKDLKDSQHFLLS 338
           FG KTGDMLWNYCRG+DNR+VG+IQESKS+GA+VNWGVRF DLKDS+HFL++
Sbjct: 586 FGTKTGDMLWNYCRGVDNRVVGVIQESKSIGAEVNWGVRFNDLKDSRHFLVN 637


>ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis]
           gi|223542041|gb|EEF43585.1| terminal deoxycytidyl
           transferase rev1, putative [Ricinus communis]
          Length = 1200

 Score =  176 bits (446), Expect = 2e-42
 Identities = 78/112 (69%), Positives = 102/112 (91%)
 Frame = +3

Query: 3   SAKPNNQCFLPPEKVNDFLKDLPIKALPGIGRALEEKLRGRHVKTCGELRMISKESLQKD 182
           +AKP+ QC++ PEKV+++L +L IK LPGIG  LEEKL+ ++V+TCG+LR+ISK+SL KD
Sbjct: 517 TAKPDGQCYIRPEKVDEYLNELSIKTLPGIGHVLEEKLKKKNVRTCGQLRLISKDSLHKD 576

Query: 183 FGQKTGDMLWNYCRGIDNRLVGMIQESKSVGADVNWGVRFKDLKDSQHFLLS 338
           FG+KTG+MLWNY RGIDNRLVG+IQESKS+GA+VNWGVRF++L+DSQHFLL+
Sbjct: 577 FGKKTGEMLWNYSRGIDNRLVGVIQESKSIGAEVNWGVRFRNLQDSQHFLLN 628


>ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|222850288|gb|EEE87835.1|
           predicted protein [Populus trichocarpa]
          Length = 1191

 Score =  174 bits (440), Expect = 9e-42
 Identities = 81/112 (72%), Positives = 98/112 (87%)
 Frame = +3

Query: 3   SAKPNNQCFLPPEKVNDFLKDLPIKALPGIGRALEEKLRGRHVKTCGELRMISKESLQKD 182
           SAKPN QC++P   V+++L  LPIKALPGIG  LEEKL+ ++V TCG+LR+ISKESLQKD
Sbjct: 592 SAKPNGQCYIPSVSVDEYLHKLPIKALPGIGHVLEEKLKKQNVWTCGQLRLISKESLQKD 651

Query: 183 FGQKTGDMLWNYCRGIDNRLVGMIQESKSVGADVNWGVRFKDLKDSQHFLLS 338
           FG KTG+MLWNY RG+DNRLVG IQESK++GA+VNWGVRFKDL+DSQ FLL+
Sbjct: 652 FGLKTGEMLWNYSRGVDNRLVGNIQESKTIGAEVNWGVRFKDLQDSQCFLLN 703


>ref|XP_004159933.1| PREDICTED: DNA repair protein REV1-like [Cucumis sativus]
          Length = 1032

 Score =  172 bits (437), Expect = 2e-41
 Identities = 80/112 (71%), Positives = 96/112 (85%)
 Frame = +3

Query: 3   SAKPNNQCFLPPEKVNDFLKDLPIKALPGIGRALEEKLRGRHVKTCGELRMISKESLQKD 182
           +AKP+ QC++P EKV+D+L  LPIK LPGIG ALEEKL+ R V TC +LRM+SK+SLQKD
Sbjct: 498 TAKPDGQCYIPLEKVDDYLNPLPIKDLPGIGHALEEKLKKRSVLTCSQLRMLSKDSLQKD 557

Query: 183 FGQKTGDMLWNYCRGIDNRLVGMIQESKSVGADVNWGVRFKDLKDSQHFLLS 338
           FG KTG+MLWNY RG+DNR VG+IQESKS+GA+VNWGVRFKD KD Q FLL+
Sbjct: 558 FGLKTGEMLWNYSRGVDNRAVGLIQESKSIGAEVNWGVRFKDFKDCQCFLLN 609


Top