BLASTX nr result

ID: Atractylodes21_contig00031821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031821
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [...   164   7e-39
ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...   155   4e-36
ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
emb|CBI15710.3| unnamed protein product [Vitis vinifera]              151   6e-35
ref|XP_003526941.1| PREDICTED: RNA pseudourine synthase 7-like [...   149   3e-34

>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 385

 Score =  164 bits (415), Expect = 7e-39
 Identities = 80/104 (76%), Positives = 89/104 (85%)
 Frame = +1

Query: 40  IKRKHRSLIMKRNREDMEIVWQTPANLPERHDYIFRDGIRYVKPYYFEFISHAKNRWAGK 219
           +KRK      + N+ DMEIVWQTPAN PE+HDYIFRDG R+V+PYYFEFISHAKNRWAGK
Sbjct: 1   MKRKRE----EENKNDMEIVWQTPANPPEKHDYIFRDGRRHVRPYYFEFISHAKNRWAGK 56

Query: 220 TIVDLFADEFKGRNRDYYDSAVKSGRIQVDGKTVPVSYRVQSSQ 351
           TIVDLFA+EFKGR  DYY SAVK GRIQVDG+TVPVSY V+SSQ
Sbjct: 57  TIVDLFAEEFKGRPYDYYVSAVKCGRIQVDGETVPVSYIVKSSQ 100


>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis
           vinifera] gi|359491114|ref|XP_002280549.2| PREDICTED:
           RNA pseudourine synthase 7-like isoform 1 [Vitis
           vinifera]
          Length = 386

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/98 (76%), Positives = 85/98 (86%), Gaps = 3/98 (3%)
 Frame = +1

Query: 67  MKRNRED---MEIVWQTPANLPERHDYIFRDGIRYVKPYYFEFISHAKNRWAGKTIVDLF 237
           MKR R++   MEIVWQTPAN PERHDYIFR+G R+V+PYYFEFISH KNRWAGKTIVDLF
Sbjct: 1   MKRRRDEAAEMEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLF 60

Query: 238 ADEFKGRNRDYYDSAVKSGRIQVDGKTVPVSYRVQSSQ 351
            +EFKGR  DYY +AV+SGRIQVDG+ VPVSY V+SSQ
Sbjct: 61  TEEFKGRPYDYYVNAVQSGRIQVDGEMVPVSYIVRSSQ 98


>ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|222868725|gb|EEF05856.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  152 bits (385), Expect = 2e-35
 Identities = 76/103 (73%), Positives = 84/103 (81%), Gaps = 8/103 (7%)
 Frame = +1

Query: 67  MKRNRED--------MEIVWQTPANLPERHDYIFRDGIRYVKPYYFEFISHAKNRWAGKT 222
           MKR R +        MEIVWQTPAN PE+HDYIFRDG R+V+PY+FEFISH KNRWAGKT
Sbjct: 1   MKRKRGEKEEAAEKKMEIVWQTPANPPEKHDYIFRDGRRHVRPYHFEFISHVKNRWAGKT 60

Query: 223 IVDLFADEFKGRNRDYYDSAVKSGRIQVDGKTVPVSYRVQSSQ 351
           IVDLFA+EFKGR  DYY SAVK GRIQVDG+ VPVSY V+SSQ
Sbjct: 61  IVDLFAEEFKGRPYDYYVSAVKCGRIQVDGEMVPVSYIVKSSQ 103


>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  151 bits (381), Expect = 6e-35
 Identities = 71/88 (80%), Positives = 79/88 (89%)
 Frame = +1

Query: 88  MEIVWQTPANLPERHDYIFRDGIRYVKPYYFEFISHAKNRWAGKTIVDLFADEFKGRNRD 267
           MEIVWQTPAN PERHDYIFR+G R+V+PYYFEFISH KNRWAGKTIVDLF +EFKGR  D
Sbjct: 1   MEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYD 60

Query: 268 YYDSAVKSGRIQVDGKTVPVSYRVQSSQ 351
           YY +AV+SGRIQVDG+ VPVSY V+SSQ
Sbjct: 61  YYVNAVQSGRIQVDGEMVPVSYIVRSSQ 88


>ref|XP_003526941.1| PREDICTED: RNA pseudourine synthase 7-like [Glycine max]
          Length = 381

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/99 (73%), Positives = 82/99 (82%), Gaps = 4/99 (4%)
 Frame = +1

Query: 67  MKRNREDME----IVWQTPANLPERHDYIFRDGIRYVKPYYFEFISHAKNRWAGKTIVDL 234
           MKR RE  E    IVWQTPAN P  +DY+FR+GIRYV+PYYFEFI+H KNRWAGKTIVDL
Sbjct: 1   MKRKREGKEGMDNIVWQTPANPPHPNDYVFRNGIRYVRPYYFEFIAHVKNRWAGKTIVDL 60

Query: 235 FADEFKGRNRDYYDSAVKSGRIQVDGKTVPVSYRVQSSQ 351
           FA+EFKGR  +YY SAVK GRIQVDG+ VPVSY V+SSQ
Sbjct: 61  FAEEFKGRPYEYYVSAVKCGRIQVDGEMVPVSYIVKSSQ 99


Top