BLASTX nr result

ID: Atractylodes21_contig00031739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031739
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_003635315.1| PREDICTED: pre-mRNA-splicing factor syf1-lik...   122   3e-26
emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]   122   3e-26
ref|XP_002521433.1| XPA-binding protein, putative [Ricinus commu...   121   5e-26
ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   119   2e-25

>ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|222847967|gb|EEE85514.1|
           predicted protein [Populus trichocarpa]
          Length = 908

 Score =  124 bits (311), Expect = 8e-27
 Identities = 69/120 (57%), Positives = 82/120 (68%), Gaps = 2/120 (1%)
 Frame = +3

Query: 15  GCYRKFTDEVGRLWTSLADYHIRRKLLEKARDVFEEGMTIVVTVSDFSVIFEAYSQFEKS 194
           G  RKFTDEVGRLWTSLADY+IRR+L EKARD+FEEGMT VVTV DFSVIF+AYSQFE+S
Sbjct: 239 GGIRKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMTTVVTVRDFSVIFDAYSQFEES 298

Query: 195 VLALKMXXXXXXXXXXXXXXXXXXXXXXXXRLN-VAKLEEK-LKKFWLCDEKDVDLRIAR 368
           ++A+KM                        RL+  +K E+K L  FWL D+ DVDL +AR
Sbjct: 299 MVAIKMEKMDLSDDEENEVEENGIELDEDVRLDWSSKFEKKLLNGFWLDDDNDVDLMLAR 358


>ref|XP_003635315.1| PREDICTED: pre-mRNA-splicing factor syf1-like [Vitis vinifera]
          Length = 816

 Score =  122 bits (306), Expect = 3e-26
 Identities = 71/122 (58%), Positives = 79/122 (64%), Gaps = 4/122 (3%)
 Frame = +3

Query: 15  GCYRKFTDEVGRLWTSLADYHIRRKLLEKARDVFEEGMTIVVTVSDFSVIFEAYSQFEKS 194
           G  RKFTDEVGRLWTSLADY+IRR L EKARD+FEEGMT VVTV DFSVIF+AYSQFE+S
Sbjct: 239 GGIRKFTDEVGRLWTSLADYYIRRNLTEKARDIFEEGMTTVVTVRDFSVIFDAYSQFEES 298

Query: 195 VLALK---MXXXXXXXXXXXXXXXXXXXXXXXXRLNVAKLEEK-LKKFWLCDEKDVDLRI 362
           +LA K   M                         L+VA  E+K L  FWL D  DVDLR+
Sbjct: 299 MLAYKMENMDSDEEEDDVQDNDTDEEEDIRLDINLSVANFEKKILHGFWLHDFNDVDLRL 358

Query: 363 AR 368
           AR
Sbjct: 359 AR 360


>emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]
          Length = 920

 Score =  122 bits (306), Expect = 3e-26
 Identities = 72/122 (59%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
 Frame = +3

Query: 15  GCYRKFTDEVGRLWTSLADYHIRRKLLEKARDVFEEGMTIVVTVSDFSVIFEAYSQFEKS 194
           G  RKFTDEVGRLWTSLADY+IRR L EKARD+FEEGMT VVTV DFSVIF+AYSQFE+S
Sbjct: 239 GGIRKFTDEVGRLWTSLADYYIRRNLTEKARDIFEEGMTTVVTVRDFSVIFDAYSQFEES 298

Query: 195 VLALK---MXXXXXXXXXXXXXXXXXXXXXXXXRLNVAKLEEK-LKKFWLCDEKDVDLRI 362
           +LA K   M                         L+VA  E+K L  FWL D  DVDLR+
Sbjct: 299 MLAYKMENMDSDEEEDDVQDNDTDEEXDIRLDINLSVANFEKKILHGFWLHDFNDVDLRL 358

Query: 363 AR 368
           AR
Sbjct: 359 AR 360


>ref|XP_002521433.1| XPA-binding protein, putative [Ricinus communis]
           gi|223539332|gb|EEF40923.1| XPA-binding protein,
           putative [Ricinus communis]
          Length = 916

 Score =  121 bits (304), Expect = 5e-26
 Identities = 69/120 (57%), Positives = 80/120 (66%), Gaps = 2/120 (1%)
 Frame = +3

Query: 15  GCYRKFTDEVGRLWTSLADYHIRRKLLEKARDVFEEGMTIVVTVSDFSVIFEAYSQFEKS 194
           G  RKFTDEVGRLWTSLADY+IRR L EKARD+FEEGMT VVTV DFSVIF+AYSQFE+S
Sbjct: 239 GGIRKFTDEVGRLWTSLADYYIRRGLFEKARDIFEEGMTTVVTVRDFSVIFDAYSQFEES 298

Query: 195 VLALKMXXXXXXXXXXXXXXXXXXXXXXXXRLNV-AKLEEK-LKKFWLCDEKDVDLRIAR 368
           ++A KM                        RL V +K E+K L  FWL ++ DVDL +AR
Sbjct: 299 MVAHKMESLDLSDDEGEALEESGDEKDEDVRLEVNSKFEKKMLNGFWLHEDNDVDLMLAR 358


>ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 912

 Score =  119 bits (299), Expect = 2e-25
 Identities = 68/125 (54%), Positives = 82/125 (65%), Gaps = 7/125 (5%)
 Frame = +3

Query: 15  GCYRKFTDEVGRLWTSLADYHIRRKLLEKARDVFEEGMTIVVTVSDFSVIFEAYSQFEKS 194
           G  RKFTDEVGRLWTSLA+Y+IRR L EKARD+FEEGMT VVTV DFSVIF++YSQFE+S
Sbjct: 239 GGIRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEES 298

Query: 195 VLALKM------XXXXXXXXXXXXXXXXXXXXXXXXRLNVAKLEEK-LKKFWLCDEKDVD 353
           +LA KM                               L+V+K E+K L+ FWL D+ D+D
Sbjct: 299 MLAHKMENMDLSDEEDEVQENGLEEEEEEEDIRLDVDLSVSKFEKKILQGFWLYDDNDID 358

Query: 354 LRIAR 368
           LR+AR
Sbjct: 359 LRLAR 363


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