BLASTX nr result

ID: Atractylodes21_contig00031721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031721
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|2...   163   4e-38
emb|CBI38318.3| unnamed protein product [Vitis vinifera]              162   8e-38
ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g...   156   3e-36
ref|XP_003590867.1| F-box protein PP2-B1 [Medicago truncatula] g...   154   1e-35
gb|ACU24548.1| unknown [Glycine max]                                  154   2e-35

>ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|222865782|gb|EEF02913.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  163 bits (412), Expect = 4e-38
 Identities = 93/201 (46%), Positives = 111/201 (55%), Gaps = 29/201 (14%)
 Frame = -2

Query: 702 SFKLDRWSGKKCYMLGARELSIAWQDDTRYWAWGPIPESRFSEVGILKSVCWLDIRGKIA 523
           S  L++ SGKKCYML AR+L I W D   YW W   P SRF EV  L SVCWL+IRGKI 
Sbjct: 101 SISLEKKSGKKCYMLSARDLIIVWGDTPTYWKWNSDPSSRFGEVAELISVCWLEIRGKIN 160

Query: 522 AVMLSPKSTYVVYLVFRTGRYSMGLSVAAKTIVSFGGIGMETS--NVYLE---------- 379
           A MLSP + Y  YLVFR  R   GL       V  G +G E    NVYL+          
Sbjct: 161 ATMLSPATLYTAYLVFRPTRGLYGLDY-QPVEVGVGLVGSECGMRNVYLDSERGRRQQYH 219

Query: 378 ----------------RPDHVPLQEND-VFPSERNDGWMEIKLGEFYCDNGDGGEVEMVF 250
                            P   P +EN+  +P +R DGW+EI+LGEF+C  G+  E+EM  
Sbjct: 220 FVSRRIGLFNRCRIVGMPASEPARENNGQYPKKREDGWLEIELGEFFCKEGEDRELEMSV 279

Query: 249 QEIWTGGWKHGLIVEGIELRP 187
           QE+  G WK GLIVEGIE+RP
Sbjct: 280 QEVKGGDWKGGLIVEGIEIRP 300


>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  162 bits (409), Expect = 8e-38
 Identities = 81/177 (45%), Positives = 109/177 (61%), Gaps = 5/177 (2%)
 Frame = -2

Query: 702 SFKLDRWSGKKCYMLGARELSIAWQDDTRYWAWGPIPESRFSEVGILKSVCWLDIRGKIA 523
           SF L++ SGKKCYML +REL+I W D   YW W  +PESRF EV  L++VCW +IRGKI 
Sbjct: 107 SFWLEKRSGKKCYMLASRELTIIWGDTPGYWEWTSLPESRFPEVAYLQAVCWFEIRGKIN 166

Query: 522 AVMLSPKSTYVVYLVFRTGRYSMGLSVAAKTIVSFGGIGMETSNVYLE--RPDHVP---L 358
             MLSP++ Y  YLVF  GR      V  ++ +   G    T  +YL   R +  P   +
Sbjct: 167 TCMLSPRTNYAAYLVFHAGRSHGFEDVPVESSIEIVGNETTTRVIYLARYRKNEEPTSSI 226

Query: 357 QENDVFPSERNDGWMEIKLGEFYCDNGDGGEVEMVFQEIWTGGWKHGLIVEGIELRP 187
           + +  +P +R D W EI+LGEF+ + G+  E+E+   E+  G WK GLIVEGIE+RP
Sbjct: 227 RSDLPYPKKREDSWFEIELGEFFIEGGEDTELEITLMEVKAGHWKDGLIVEGIEIRP 283


>ref|XP_002308717.1| f-box family protein [Populus trichocarpa]
           gi|222854693|gb|EEE92240.1| f-box family protein
           [Populus trichocarpa]
          Length = 292

 Score =  156 bits (395), Expect = 3e-36
 Identities = 90/201 (44%), Positives = 108/201 (53%), Gaps = 29/201 (14%)
 Frame = -2

Query: 702 SFKLDRWSGKKCYMLGARELSIAWQDDTRYWAWGPIPESRFSEVGILKSVCWLDIRGKIA 523
           SF L + SGKKCYML AR+L I W D   YW W     SRF EV  L  VCWL+I GKI 
Sbjct: 90  SFSLVKKSGKKCYMLSARDLMIVWGDTPTYWRWNSDSSSRFGEVAELIGVCWLEICGKIN 149

Query: 522 AVMLSPKSTYVVYLVFRTGRYSMGLSVAAKTIVSFGGIGMETS--NVYLE---------- 379
           A MLSP + Y  YLVF+    + GL       V  G +G E    NVYL+          
Sbjct: 150 ATMLSPATLYAAYLVFKPKEGAYGLDY-QPVEVGVGLVGSENGKRNVYLDSQRGRAHRYH 208

Query: 378 ----------------RPDHVPLQEND-VFPSERNDGWMEIKLGEFYCDNGDGGEVEMVF 250
                             + VP  EN+   P ER DGW+EI+LGEF+C  G+ GE+EM  
Sbjct: 209 LVRRRIGLHNRSRIVGMQEPVPASENNGQHPKERGDGWLEIELGEFFCKEGEDGELEMRV 268

Query: 249 QEIWTGGWKHGLIVEGIELRP 187
           QE+ +G WK GL VEGIE+RP
Sbjct: 269 QEVKSGDWKGGLTVEGIEIRP 289


>ref|XP_003590867.1| F-box protein PP2-B1 [Medicago truncatula]
           gi|355479915|gb|AES61118.1| F-box protein PP2-B1
           [Medicago truncatula]
          Length = 269

 Score =  154 bits (390), Expect = 1e-35
 Identities = 88/201 (43%), Positives = 114/201 (56%), Gaps = 30/201 (14%)
 Frame = -2

Query: 702 SFKLDRWSGKKCYMLGARELSIAWQDDTRYWAWGPIPESRFSEVGILKSVCWLDIRGKIA 523
           SF+LD+  GKKCYML AR L I W D  RYW W  +P+SRFSEV  L SVCW +IRG I 
Sbjct: 64  SFQLDKVDGKKCYMLSARSLFIVWGDTLRYWKWTSVPDSRFSEVAELVSVCWFEIRGWIN 123

Query: 522 AVMLSPKSTYVVYLVFR---TGRYSMGLSVAAKTIVSFGGIGMETSNVYLE--------- 379
            +MLSPK+ Y  YLVF+   +G Y         +IV  GG  +E  NV+L+         
Sbjct: 124 TIMLSPKTLYGAYLVFKSSASGTYGFEYQPCEASIVIAGGDTVE-RNVFLDVERGRRLRY 182

Query: 378 ---------------RPDHVPLQEND---VFPSERNDGWMEIKLGEFYCDNGDGGEVEMV 253
                          RP   P++  D     P ER DGW+E++LGEF+ + G+  EVE+ 
Sbjct: 183 QIVHRFRTTGIFTRLRPLVEPIESVDDMQKHPKERADGWLEMELGEFFNEGGNDKEVEIG 242

Query: 252 FQEIWTGGWKHGLIVEGIELR 190
             E+  GGWK GL+V+GIE+R
Sbjct: 243 VCEVKGGGWKGGLVVQGIEIR 263


>gb|ACU24548.1| unknown [Glycine max]
          Length = 264

 Score =  154 bits (389), Expect = 2e-35
 Identities = 81/178 (45%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
 Frame = -2

Query: 702 SFKLDRWSGKKCYMLGARELSIAWQDDTRYWAWGPIPESRFSEVGILKSVCWLDIRGKIA 523
           SFKLD+ SGKK Y+L AR+LSI W +D  YW+W P+PESRF EV  L++V WL+I+GKI 
Sbjct: 87  SFKLDKSSGKKSYILSARQLSITWSNDPLYWSWRPVPESRFKEVAELRTVSWLEIQGKIG 146

Query: 522 AVMLSPKSTYVVYLVFRTGRYSMGL-SVAAKTIVSFGGIGMETSNVYL---ERPDHVPLQ 355
             +L+P ++YVVYL+ +T     GL SVA +  ++      ++  VYL   E+ ++   +
Sbjct: 147 TRILTPNTSYVVYLIMKTSHREYGLDSVACEVSIAVDNKVKQSGRVYLCQNEKDENNLKK 206

Query: 354 ENDVFPSERNDGWMEIKLGEFYCDNGDGGEVEMVFQEIWTGGW--KHGLIVEGIELRP 187
           E+   P  R DGWMEI++GEF+C   D    E V   +   G+  K GLIVEG+E+RP
Sbjct: 207 ESIGIPMRREDGWMEIEMGEFFCGEAD----EEVLMSLMEVGYQLKGGLIVEGVEIRP 260


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