BLASTX nr result

ID: Atractylodes21_contig00031700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031700
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26
emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]   122   2e-26
ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-26

>ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Glycine max]
          Length = 986

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/79 (70%), Positives = 70/79 (88%)
 Frame = +1

Query: 1    QLEKAMEVIKRMPMEPSPIVWVALLGSCRVHTNVELGEYASRKLLELGCENDGTYTLLSN 180
            +L +AM++I  MPMEP+P+VWVALL +CR+H+NVELGE+A+ +LLEL   NDG+YTLLSN
Sbjct: 766  RLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSN 825

Query: 181  IYANARRWKDVARVRYLMK 237
            IYANARRWKDVAR+RY MK
Sbjct: 826  IYANARRWKDVARIRYTMK 844


>ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|222858987|gb|EEE96534.1|
           predicted protein [Populus trichocarpa]
          Length = 539

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/80 (73%), Positives = 70/80 (87%)
 Frame = +1

Query: 1   QLEKAMEVIKRMPMEPSPIVWVALLGSCRVHTNVELGEYASRKLLELGCENDGTYTLLSN 180
           +L +AME+I+ M MEPS IVWVALL  CR+H NVELGE+A+++LLEL  ENDG+YTLLSN
Sbjct: 319 RLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSYTLLSN 378

Query: 181 IYANARRWKDVARVRYLMKD 240
           IYANARRWKDVARVR LMK+
Sbjct: 379 IYANARRWKDVARVRSLMKN 398


>ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  122 bits (307), Expect = 2e-26
 Identities = 57/80 (71%), Positives = 71/80 (88%)
 Frame = +1

Query: 1   QLEKAMEVIKRMPMEPSPIVWVALLGSCRVHTNVELGEYASRKLLELGCENDGTYTLLSN 180
           +L++AME+I+ MPM+P+P VWVALL +CRV+ NVELGEYA+ +LLEL   NDG+YTLLSN
Sbjct: 632 RLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSN 691

Query: 181 IYANARRWKDVARVRYLMKD 240
           IYANAR WKDVAR+RYLMK+
Sbjct: 692 IYANARCWKDVARIRYLMKN 711


>emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  122 bits (307), Expect = 2e-26
 Identities = 57/80 (71%), Positives = 71/80 (88%)
 Frame = +1

Query: 1   QLEKAMEVIKRMPMEPSPIVWVALLGSCRVHTNVELGEYASRKLLELGCENDGTYTLLSN 180
           +L++AME+I+ MPM+P+P VWVALL +CRV+ NVELGEYA+ +LLEL   NDG+YTLLSN
Sbjct: 651 RLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSN 710

Query: 181 IYANARRWKDVARVRYLMKD 240
           IYANAR WKDVAR+RYLMK+
Sbjct: 711 IYANARCWKDVARIRYLMKN 730


>ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
           gi|449479088|ref|XP_004155501.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/79 (70%), Positives = 68/79 (86%)
 Frame = +1

Query: 1   QLEKAMEVIKRMPMEPSPIVWVALLGSCRVHTNVELGEYASRKLLELGCENDGTYTLLSN 180
           +L +AME+IK M MEP+ +VWVALL + R+H N+ELGEYA+ KL ELG ENDG+YTLLSN
Sbjct: 635 RLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSN 694

Query: 181 IYANARRWKDVARVRYLMK 237
           +YANARRWKDVAR+R LMK
Sbjct: 695 LYANARRWKDVARIRSLMK 713


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