BLASTX nr result

ID: Atractylodes21_contig00031603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031603
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155654.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...    98   6e-19
ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...    98   6e-19
ref|XP_003635315.1| PREDICTED: pre-mRNA-splicing factor syf1-lik...    96   3e-18
emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]    96   3e-18
ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|2...    91   8e-17

>ref|XP_004155654.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 650

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/59 (76%), Positives = 54/59 (91%), Gaps = 1/59 (1%)
 Frame = -3

Query: 175 LNVAKLEEK-LKKFWLCDEKDVDLRIARLEHLMDRRPELANSVLLRQNPHNVEQWHRRV 2
           L+V+K E+K L+ FWL D+ D+DLR+ARL+HLMDRRPELANSVLLRQNPHNVEQWHRR+
Sbjct: 70  LSVSKFEKKILQGFWLYDDNDIDLRLARLDHLMDRRPELANSVLLRQNPHNVEQWHRRI 128


>ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 912

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/59 (76%), Positives = 54/59 (91%), Gaps = 1/59 (1%)
 Frame = -3

Query: 175 LNVAKLEEK-LKKFWLCDEKDVDLRIARLEHLMDRRPELANSVLLRQNPHNVEQWHRRV 2
           L+V+K E+K L+ FWL D+ D+DLR+ARL+HLMDRRPELANSVLLRQNPHNVEQWHRR+
Sbjct: 336 LSVSKFEKKILQGFWLYDDNDIDLRLARLDHLMDRRPELANSVLLRQNPHNVEQWHRRI 394


>ref|XP_003635315.1| PREDICTED: pre-mRNA-splicing factor syf1-like [Vitis vinifera]
          Length = 816

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/59 (79%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
 Frame = -3

Query: 175 LNVAKLEEK-LKKFWLCDEKDVDLRIARLEHLMDRRPELANSVLLRQNPHNVEQWHRRV 2
           L+VA  E+K L  FWL D  DVDLR+ARLEHLMDRRPELANSVLLRQNPHNVEQWHRR+
Sbjct: 333 LSVANFEKKILHGFWLHDFNDVDLRLARLEHLMDRRPELANSVLLRQNPHNVEQWHRRI 391


>emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]
          Length = 920

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/59 (79%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
 Frame = -3

Query: 175 LNVAKLEEK-LKKFWLCDEKDVDLRIARLEHLMDRRPELANSVLLRQNPHNVEQWHRRV 2
           L+VA  E+K L  FWL D  DVDLR+ARLEHLMDRRPELANSVLLRQNPHNVEQWHRR+
Sbjct: 333 LSVANFEKKILHGFWLHDFNDVDLRLARLEHLMDRRPELANSVLLRQNPHNVEQWHRRI 391


>ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|222847967|gb|EEE85514.1|
           predicted protein [Populus trichocarpa]
          Length = 908

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 44/56 (78%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
 Frame = -3

Query: 166 AKLEEKLKK-FWLCDEKDVDLRIARLEHLMDRRPELANSVLLRQNPHNVEQWHRRV 2
           +K E+KL   FWL D+ DVDL +ARLE+LMDRRPELANSVLLRQNPHNVEQWHRRV
Sbjct: 334 SKFEKKLLNGFWLDDDNDVDLMLARLEYLMDRRPELANSVLLRQNPHNVEQWHRRV 389


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