BLASTX nr result

ID: Atractylodes21_contig00031602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031602
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34146.3| unnamed protein product [Vitis vinifera]              266   2e-69
ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein lig...   266   2e-69
ref|XP_002510629.1| guanine nucleotide exchange factor P532, put...   263   8e-69
ref|XP_002331537.1| predicted protein [Populus trichocarpa] gi|2...   256   2e-66
ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein lig...   251   3e-65

>emb|CBI34146.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  266 bits (679), Expect = 2e-69
 Identities = 121/155 (78%), Positives = 138/155 (89%)
 Frame = -1

Query: 465 LSTPSKVKALPVPVVSVACGGFFTTVITDDGQLWNWGANSNNELGRGNRVGGWKPQPIPG 286
           LS PSKVKALPVPV +V+CGGFFT V+T +GQLWNWGANSN ELGRG++VGGWKPQPIP 
Sbjct: 134 LSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPS 193

Query: 285 LEGVHIVQIASGGYHSLALTDEGRVLSWGYGGHGQLGHFSTQNQSVPSVIESLASEKVVN 106
           L+ V I+QIASGGYHSLALTD+G+VLSWGYG HGQLGH S +NQ +P+VIE+LA E V+ 
Sbjct: 194 LQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIY 253

Query: 105 IACGGSSSAAVTDKGRLYMWGNAKDGQLGVPGLPE 1
           IACGGSSSAA+TD G+LYMWGNAKD QLGVPGLPE
Sbjct: 254 IACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPE 288



 Score = 56.2 bits (134), Expect(2) = 5e-08
 Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
 Frame = -1

Query: 201 GYGGHGQLGHFSTQNQSVPSVIESLASEKVVNIACGGSSSAAVTDKGRLYMWGNAK-DGQ 25
           GYGG G LGH     + +P ++E   + K+ +IA  G+ +AA+T+ G LY WG  + DG+
Sbjct: 60  GYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTWGRDQGDGR 119

Query: 24  LGV 16
           LG+
Sbjct: 120 LGL 122



 Score = 25.8 bits (55), Expect(2) = 5e-08
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 377 MANCGTGVQIQTMSLEEVIEWVVGSLNLFPVWRVFIL 267
           MA+CG G +    +   V   ++  L L P+W  F+L
Sbjct: 1   MASCGFGAKAMVDAWALVRSTLLFCLRLIPIWIQFVL 37


>ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 489

 Score =  266 bits (679), Expect = 2e-69
 Identities = 121/155 (78%), Positives = 138/155 (89%)
 Frame = -1

Query: 465 LSTPSKVKALPVPVVSVACGGFFTTVITDDGQLWNWGANSNNELGRGNRVGGWKPQPIPG 286
           LS PSKVKALPVPV +V+CGGFFT V+T +GQLWNWGANSN ELGRG++VGGWKPQPIP 
Sbjct: 239 LSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPS 298

Query: 285 LEGVHIVQIASGGYHSLALTDEGRVLSWGYGGHGQLGHFSTQNQSVPSVIESLASEKVVN 106
           L+ V I+QIASGGYHSLALTD+G+VLSWGYG HGQLGH S +NQ +P+VIE+LA E V+ 
Sbjct: 299 LQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIY 358

Query: 105 IACGGSSSAAVTDKGRLYMWGNAKDGQLGVPGLPE 1
           IACGGSSSAA+TD G+LYMWGNAKD QLGVPGLPE
Sbjct: 359 IACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPE 393



 Score =  107 bits (266), Expect = 1e-21
 Identities = 56/151 (37%), Positives = 85/151 (56%), Gaps = 1/151 (0%)
 Frame = -1

Query: 465 LSTPSKVKALPVPVVSVACGGFFTTVITDDGQLWNWGANSNNELGRGNRVGGWKPQPIPG 286
           L  PS   A  +  V ++CG F ++++ D G+LW WG      LG G     + P   P 
Sbjct: 80  LCLPSVENASGLTEVGISCGLFHSSLVVD-GKLWIWGKGDGGRLGFGQEYPAFLPTLNPN 138

Query: 285 LEGVHIVQIASGGYHSLALTDEGRVLSWGYGGHGQLGHFSTQNQSVPSVIESLASEKVVN 106
           L+ +     A GG HS+AL+  G+V +WGYGG G LGH     + +P ++E   + K+ +
Sbjct: 139 LDSIR--STALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKIRH 196

Query: 105 IACGGSSSAAVTDKGRLYMWGNAK-DGQLGV 16
           IA  G+ +AA+T+ G LY WG  + DG+LG+
Sbjct: 197 IATAGTHTAAITESGELYTWGRDQGDGRLGL 227


>ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis] gi|223551330|gb|EEF52816.1| guanine nucleotide
           exchange factor P532, putative [Ricinus communis]
          Length = 450

 Score =  263 bits (673), Expect = 8e-69
 Identities = 118/155 (76%), Positives = 139/155 (89%)
 Frame = -1

Query: 465 LSTPSKVKALPVPVVSVACGGFFTTVITDDGQLWNWGANSNNELGRGNRVGGWKPQPIPG 286
           LS PSKVKAL VPV +V CGGFFT V+T++GQ+WNWGANSN ELGRGN+ GGW+P+PIP 
Sbjct: 255 LSIPSKVKALTVPVAAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPKPIPN 314

Query: 285 LEGVHIVQIASGGYHSLALTDEGRVLSWGYGGHGQLGHFSTQNQSVPSVIESLASEKVVN 106
           LEGV ++QIASGGYHSLALTDEG+VLSWG+GGHGQLGH S QNQ +P VI++LA ++VV 
Sbjct: 315 LEGVRVIQIASGGYHSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVY 374

Query: 105 IACGGSSSAAVTDKGRLYMWGNAKDGQLGVPGLPE 1
           IACGGS+SAA+TD+G+LYMWGNAKD QLGVPGLPE
Sbjct: 375 IACGGSTSAAITDEGKLYMWGNAKDSQLGVPGLPE 409



 Score =  105 bits (262), Expect = 4e-21
 Identities = 58/153 (37%), Positives = 91/153 (59%), Gaps = 2/153 (1%)
 Frame = -1

Query: 462 STPSKVKALPVPVVSVACGGFFTTVITDDGQLWNWGANSNNELGRGNRVGGWKPQPIPGL 283
           ST +K +A+ V    ++CG F + ++ D G +W WG      LG G+    + P   P L
Sbjct: 100 STITKQEAIEV---GISCGLFHSALLVD-GNIWIWGKGDGGRLGFGHENPVFVPTLNPNL 155

Query: 282 EGVHIVQIASGGYHSLALTDEGRVLSWGYGGHGQLGHFSTQNQSVPSVIESLASEKVVNI 103
           +    V  A GG HS+ALT  G+V +WGYGG G LGH     + +P +++ +++EK+ +I
Sbjct: 156 DPAKCV--ALGGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKIRHI 213

Query: 102 ACGGSSSAAVTDKGRLYMWGNAK-DGQLGV-PG 10
           A  G+ +AA+T+ G +Y WG  + DG+LG+ PG
Sbjct: 214 ATSGTHTAAITETGEVYTWGRDEGDGRLGLGPG 246


>ref|XP_002331537.1| predicted protein [Populus trichocarpa] gi|222873761|gb|EEF10892.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  256 bits (653), Expect = 2e-66
 Identities = 113/155 (72%), Positives = 135/155 (87%)
 Frame = -1

Query: 465 LSTPSKVKALPVPVVSVACGGFFTTVITDDGQLWNWGANSNNELGRGNRVGGWKPQPIPG 286
           LS P KVK LPVPV +V CGGFFT V+T++GQ+WNWGANSN ELGRG++VGGW+P+PIP 
Sbjct: 127 LSIPCKVKTLPVPVATVYCGGFFTMVLTEEGQIWNWGANSNYELGRGDKVGGWRPKPIPS 186

Query: 285 LEGVHIVQIASGGYHSLALTDEGRVLSWGYGGHGQLGHFSTQNQSVPSVIESLASEKVVN 106
           LE   I+QIA GGYH LALTDEG+VLSWG+GGHGQLGH S Q+Q +P+VI++LA + V+ 
Sbjct: 187 LEDARIIQIAGGGYHCLALTDEGKVLSWGFGGHGQLGHSSIQSQKIPAVIDALADQHVIY 246

Query: 105 IACGGSSSAAVTDKGRLYMWGNAKDGQLGVPGLPE 1
           IACGGSSSAA+TDKG+LYMWGNAKD QLG+PGLPE
Sbjct: 247 IACGGSSSAAITDKGKLYMWGNAKDSQLGIPGLPE 281



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
 Frame = -1

Query: 360 WGANSNNELGRGNRVGGWKPQPIPGLEGVHIVQIASGGYHSLALTDEGRVLSWGYGGHGQ 181
           WG      LG G+    + P   P L+ V    IA GG HS A+T  G + +WGYGG G 
Sbjct: 2   WGKGDGGRLGFGHENPAFLPTLNPFLDSVR--SIALGGVHSAAITSLGHIFTWGYGGFGA 59

Query: 180 LGHFSTQNQSVPSVIESLASEKVVNIACGGSSSAAVTDKGRLYMWGNAK-DGQLGV-PG 10
           LGH     +  P ++E     K+  I+  G+ +AAVT+ G +Y WG  + DG+LG+ PG
Sbjct: 60  LGHSVYHRELFPRLVEGSWDGKIRCISTSGTHTAAVTESGEVYTWGREEGDGRLGLGPG 118


>ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 444

 Score =  251 bits (642), Expect = 3e-65
 Identities = 110/154 (71%), Positives = 133/154 (86%)
 Frame = -1

Query: 465 LSTPSKVKALPVPVVSVACGGFFTTVITDDGQLWNWGANSNNELGRGNRVGGWKPQPIPG 286
           LS PSKVK LP P+ +V+CGGFFT  +T DGQLWNWGANSN ELGRG+++GGWKP+P+P 
Sbjct: 249 LSIPSKVKELPYPIAAVSCGGFFTMALTVDGQLWNWGANSNYELGRGDKIGGWKPRPVPS 308

Query: 285 LEGVHIVQIASGGYHSLALTDEGRVLSWGYGGHGQLGHFSTQNQSVPSVIESLASEKVVN 106
           LE V I+Q+ASGGYHSLALTD+G+VLSWG+GG GQLGH S QNQ +P+V+E+LA E ++ 
Sbjct: 309 LENVKIIQLASGGYHSLALTDDGKVLSWGHGGQGQLGHGSIQNQKIPAVVEALAHENIIY 368

Query: 105 IACGGSSSAAVTDKGRLYMWGNAKDGQLGVPGLP 4
           I+CGGSSSAAVTD G+LYMWGNA D QLG+PGLP
Sbjct: 369 ISCGGSSSAAVTDNGKLYMWGNANDSQLGIPGLP 402



 Score =  105 bits (262), Expect = 4e-21
 Identities = 59/157 (37%), Positives = 90/157 (57%), Gaps = 7/157 (4%)
 Frame = -1

Query: 459 TPSKVKALPVPV-----VSVACGGFFTTVITDDGQLWNWGANSNNELGRGNRVGGWKPQP 295
           TP + + LP P      V ++CG F +++I D G LW WG      LG G+    + P  
Sbjct: 87  TPGRRRLLPSPPKRALEVGLSCGLFHSSLIVD-GALWIWGKGDGGRLGFGHENPLFVPTL 145

Query: 294 IPGLEGVHIVQIASGGYHSLALTDEGRVLSWGYGGHGQLGHFSTQNQSVPSVIESLASEK 115
            P L+  +++ +A GG HS+ALT +G V +WGYGG G LGH     +  P +++      
Sbjct: 146 NPHLD--NLLSVALGGLHSVALTSDGEVFTWGYGGFGALGHSVYHRELFPRLVKGSWEGT 203

Query: 114 VVNIACGGSSSAAVTDKGRLYMWGNAK-DGQLGV-PG 10
           + +IA  G+ +AA+T+ G LY+WG  + DG+LG+ PG
Sbjct: 204 IKHIATSGTHTAAITESGELYIWGRDEGDGRLGLGPG 240


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