BLASTX nr result

ID: Atractylodes21_contig00031590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031590
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS90324.2| 3-dehydroquinate dehydratase / shikimate dehydrog...   110   9e-23
ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus c...   107   1e-21
ref|XP_002319583.1| dehydroquinate dehydratase/ shikimate dehydr...    98   6e-19
ref|XP_002328402.1| dehydroquinate dehydratase/ shikimate dehydr...    96   2e-18
ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate deh...    96   2e-18

>gb|AAS90324.2| 3-dehydroquinate dehydratase / shikimate dehydrogenase isoform 2
           [Nicotiana tabacum]
          Length = 521

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/73 (73%), Positives = 62/73 (84%), Gaps = 2/73 (2%)
 Frame = +2

Query: 47  CKIIVSCFVDGV--KEDVSHLITRMQSTGADIIKLVTTAADITELSRIFHLLSHCQVPLI 220
           CK+I SCFVD V  KED+S ++  MQSTGADI+K+VT A DITEL ++FHLLSHCQVPLI
Sbjct: 127 CKVIASCFVDNVTSKEDLSQVVAHMQSTGADILKIVTNANDITELEKMFHLLSHCQVPLI 186

Query: 221 AYSTGERGLISQL 259
           AYS GERGLISQL
Sbjct: 187 AYSLGERGLISQL 199


>ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus communis]
           gi|223548259|gb|EEF49750.1| shikimate dehydrogenase,
           putative [Ricinus communis]
          Length = 519

 Score =  107 bits (266), Expect = 1e-21
 Identities = 57/90 (63%), Positives = 71/90 (78%), Gaps = 4/90 (4%)
 Frame = +2

Query: 2   VASDMMEEGGGDRRS-CKIIVSCFVDG---VKEDVSHLITRMQSTGADIIKLVTTAADIT 169
           VASD++ E  G   +  K+IVSC+V+G    KE++S L+  MQ+TGADIIKLV+TA +IT
Sbjct: 108 VASDLIGELKGTHHTGSKVIVSCYVNGDMPTKENLSQLVASMQATGADIIKLVSTANNIT 167

Query: 170 ELSRIFHLLSHCQVPLIAYSTGERGLISQL 259
           EL RIFHL+ HCQVP+IAYS GERGLISQL
Sbjct: 168 ELDRIFHLILHCQVPIIAYSVGERGLISQL 197


>ref|XP_002319583.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa] gi|222857959|gb|EEE95506.1| dehydroquinate
           dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa]
          Length = 518

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 54/90 (60%), Positives = 67/90 (74%), Gaps = 4/90 (4%)
 Frame = +2

Query: 2   VASDMMEEGGGDRRSC-KIIVSCFVDGV---KEDVSHLITRMQSTGADIIKLVTTAADIT 169
           VASD++ E     ++  K+IVS ++ G    KED+SHL+  MQ+T ADIIK+V+ A DIT
Sbjct: 108 VASDLVREVKNKHQTGGKVIVSSYLSGATPSKEDLSHLVASMQATKADIIKVVSNANDIT 167

Query: 170 ELSRIFHLLSHCQVPLIAYSTGERGLISQL 259
           EL RIFHLLSH QVP +AYS GERGLISQL
Sbjct: 168 ELDRIFHLLSHMQVPAVAYSLGERGLISQL 197


>ref|XP_002328402.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa] gi|222838117|gb|EEE76482.1| dehydroquinate
           dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa]
          Length = 518

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/73 (64%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
 Frame = +2

Query: 50  KIIVSCFVDGV---KEDVSHLITRMQSTGADIIKLVTTAADITELSRIFHLLSHCQVPLI 220
           K+IVS +++G    KE++SHL+  MQ+T ADIIK+V+ A DITE+ RIFHLLSHC+VP +
Sbjct: 125 KVIVSSYLNGATPSKENLSHLVATMQATEADIIKVVSNADDITEMERIFHLLSHCEVPAV 184

Query: 221 AYSTGERGLISQL 259
           AYS GERGLISQL
Sbjct: 185 AYSVGERGLISQL 197


>ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
           dehydrogenase, chloroplastic [Vitis vinifera]
           gi|298204989|emb|CBI34296.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 51/90 (56%), Positives = 67/90 (74%), Gaps = 4/90 (4%)
 Frame = +2

Query: 2   VASDMMEEGGGDRRSC-KIIVSCFVDGVKEDVSHLITR---MQSTGADIIKLVTTAADIT 169
           VASD + +   D+ S  + IVSC+VDGV   +  LI R   +QSTGAD+IKLV  A +IT
Sbjct: 108 VASDFLGKQKMDQHSSSRTIVSCYVDGVTPPIEDLICRVALLQSTGADMIKLVINATNIT 167

Query: 170 ELSRIFHLLSHCQVPLIAYSTGERGLISQL 259
           E+++IFHLLSHCQ+PLIAYS G+RG +SQ+
Sbjct: 168 EITKIFHLLSHCQMPLIAYSIGDRGFMSQI 197


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