BLASTX nr result

ID: Atractylodes21_contig00031562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031562
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134127.1| PREDICTED: protein RDM1-like isoform 1 [Cucu...   140   1e-31
ref|XP_003610751.1| hypothetical protein MTR_5g006600 [Medicago ...   138   4e-31
gb|AFK36829.1| unknown [Lotus japonicus] gi|388503924|gb|AFK4002...   135   4e-30
ref|XP_002311634.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|NP_001237231.1| uncharacterized protein LOC100500129 [Glycin...   134   1e-29

>ref|XP_004134127.1| PREDICTED: protein RDM1-like isoform 1 [Cucumis sativus]
           gi|449432682|ref|XP_004134128.1| PREDICTED: protein
           RDM1-like isoform 2 [Cucumis sativus]
           gi|449504162|ref|XP_004162269.1| PREDICTED: protein
           RDM1-like isoform 1 [Cucumis sativus]
           gi|449504166|ref|XP_004162270.1| PREDICTED: protein
           RDM1-like isoform 2 [Cucumis sativus]
          Length = 174

 Score =  140 bits (353), Expect = 1e-31
 Identities = 63/100 (63%), Positives = 79/100 (79%), Gaps = 3/100 (3%)
 Frame = -2

Query: 339 RGSVIPFTSWSDLATSMKQLYQQPLHYLTNIRIKEWDQMRRG---ECEALDTIVHPCKAE 169
           RGSVIPFT+W  L  S+KQLY QPLHYLTNI +K+WDQ+R G   E + LDT++HP KAE
Sbjct: 75  RGSVIPFTTWMGLGKSIKQLYGQPLHYLTNILLKQWDQLRLGSADEYKPLDTVIHPSKAE 134

Query: 168 TNIWLMEQVHRLTSSHQFLAKLWLADPMYNASIDKIFPQL 49
             +WL+E++HR TSSH  +AKLWL+DPM+ A +D IFPQL
Sbjct: 135 ATVWLVEEIHRRTSSHHHVAKLWLSDPMHQAYVDSIFPQL 174


>ref|XP_003610751.1| hypothetical protein MTR_5g006600 [Medicago truncatula]
           gi|355512086|gb|AES93709.1| hypothetical protein
           MTR_5g006600 [Medicago truncatula]
          Length = 369

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/100 (67%), Positives = 73/100 (73%), Gaps = 3/100 (3%)
 Frame = -2

Query: 339 RGSVIPFTSWSDLATSMKQLYQQPLHYLTNIRIKEWDQMRRG---ECEALDTIVHPCKAE 169
           RGSVIPFTSW  L  S+K+LY QPLHYLTNI +K+WDQMR G   E   LD I+HPCKAE
Sbjct: 266 RGSVIPFTSWMGLGQSIKKLYGQPLHYLTNIILKQWDQMRIGSEDEYRRLDDIIHPCKAE 325

Query: 168 TNIWLMEQVHRLTSSHQFLAKLWLADPMYNASIDKIFPQL 49
             IWLMEQVHR  SSH  LA LW  DPMYN  +D IFP L
Sbjct: 326 ATIWLMEQVHRQASSHFHLANLWKKDPMYNGFLDSIFPTL 365


>gb|AFK36829.1| unknown [Lotus japonicus] gi|388503924|gb|AFK40028.1| unknown
           [Lotus japonicus]
          Length = 165

 Score =  135 bits (339), Expect = 4e-30
 Identities = 63/100 (63%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
 Frame = -2

Query: 339 RGSVIPFTSWSDLATSMKQLYQQPLHYLTNIRIKEWDQMRRG---ECEALDTIVHPCKAE 169
           RGSVIPFTSW  L  S+KQLY QPLHYLTN+ +K+WDQ R G   E   LD I+HPCKAE
Sbjct: 62  RGSVIPFTSWMGLGRSLKQLYGQPLHYLTNVLLKQWDQRRIGSADELTPLDDIIHPCKAE 121

Query: 168 TNIWLMEQVHRLTSSHQFLAKLWLADPMYNASIDKIFPQL 49
             +WL E+VHR TSSH  +A LW+ DP YNA +D IFP+L
Sbjct: 122 AMVWLAEEVHRKTSSHFQIADLWMLDPKYNAFLDSIFPKL 161


>ref|XP_002311634.1| predicted protein [Populus trichocarpa] gi|222851454|gb|EEE89001.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  134 bits (338), Expect = 6e-30
 Identities = 61/100 (61%), Positives = 77/100 (77%), Gaps = 3/100 (3%)
 Frame = -2

Query: 339 RGSVIPFTSWSDLATSMKQLYQQPLHYLTNIRIKEWDQMRRG---ECEALDTIVHPCKAE 169
           RGS IPF+SW+ L  S+KQLYQQPLHYLTNI + +WDQ R G   E   LD ++HPCKAE
Sbjct: 76  RGSAIPFSSWAGLGKSIKQLYQQPLHYLTNILLNKWDQQRIGSEDEHTPLDIMIHPCKAE 135

Query: 168 TNIWLMEQVHRLTSSHQFLAKLWLADPMYNASIDKIFPQL 49
             IWL+E+VHR TSSH  +AK+W +DPM++A +D IFP+L
Sbjct: 136 ATIWLVEEVHRRTSSHHHVAKIWQSDPMHHAFVDSIFPKL 175


>ref|NP_001237231.1| uncharacterized protein LOC100500129 [Glycine max]
           gi|255629410|gb|ACU15051.1| unknown [Glycine max]
          Length = 165

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/100 (63%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
 Frame = -2

Query: 339 RGSVIPFTSWSDLATSMKQLYQQPLHYLTNIRIKEWDQMRRG---ECEALDTIVHPCKAE 169
           RG++IPFTSW  L  SMKQ+Y QPLHYLTNI +K+WDQ+R G   E + LD IVHP KAE
Sbjct: 62  RGTMIPFTSWMGLGRSMKQIYGQPLHYLTNILLKQWDQLRIGSEDEYKPLDNIVHPHKAE 121

Query: 168 TNIWLMEQVHRLTSSHQFLAKLWLADPMYNASIDKIFPQL 49
             IWL+E++HR TSSH  LA LW  DPMYN  +D IFP L
Sbjct: 122 ATIWLIEEIHRQTSSHFHLASLWKVDPMYNGFVDSIFPTL 161


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