BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031533
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...    96   3e-18
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...    95   7e-18
ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis ...    94   9e-18
dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila]      94   1e-17
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...    93   3e-17

>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
           gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
           6 [Gossypium hirsutum]
          Length = 1196

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 49/81 (60%), Positives = 56/81 (69%)
 Frame = +1

Query: 1   IQKVDEYGKVEAHAFVHFVDPDSVNTLVEAAGKGELVLFNNQLKVSLRPENPYRMNERRR 180
           IQ+ D Y KVE HAFVHF  P +V   V+AAG+ EL   N  LKVSL PENPY +N RRR
Sbjct: 66  IQRKDNYKKVEPHAFVHFASPQAVTWAVDAAGRTELAFNNQLLKVSLGPENPYYLNRRRR 125

Query: 181 TKTPFKLSNVVLEIGLLSSRD 243
             TPFKL +V LEIG L+S D
Sbjct: 126 DTTPFKLPDVSLEIGTLASCD 146


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/81 (55%), Positives = 58/81 (71%)
 Frame = +1

Query: 1   IQKVDEYGKVEAHAFVHFVDPDSVNTLVEAAGKGELVLFNNQLKVSLRPENPYRMNERRR 180
           I++ ++Y KVE HAFVHFV P++    ++AAGK EL L    LKVSL PE P+ +N+RRR
Sbjct: 66  IERTEDYKKVEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKVSLGPETPFHLNQRRR 125

Query: 181 TKTPFKLSNVVLEIGLLSSRD 243
           T  PFK  +V LEIG+L SRD
Sbjct: 126 TTFPFKFPDVRLEIGILVSRD 146


>ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata]
           gi|297323519|gb|EFH53940.1| RNA-dependent RNA polymerase
           6 [Arabidopsis lyrata subsp. lyrata]
          Length = 1197

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/81 (56%), Positives = 58/81 (71%)
 Frame = +1

Query: 1   IQKVDEYGKVEAHAFVHFVDPDSVNTLVEAAGKGELVLFNNQLKVSLRPENPYRMNERRR 180
           I K D+Y KVE HAFVHF  P+S    ++AAG+  L+L    LKVSL P+NPY +N+RRR
Sbjct: 66  IPKFDDYKKVEPHAFVHFAVPESAARAMDAAGQCNLILDGQPLKVSLGPKNPYTLNQRRR 125

Query: 181 TKTPFKLSNVVLEIGLLSSRD 243
           T TP+KL+ + LEIG L SRD
Sbjct: 126 TTTPYKLAGISLEIGTLVSRD 146


>dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila]
          Length = 998

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 45/81 (55%), Positives = 59/81 (72%)
 Frame = +1

Query: 1   IQKVDEYGKVEAHAFVHFVDPDSVNTLVEAAGKGELVLFNNQLKVSLRPENPYRMNERRR 180
           I+  ++Y +VE HAFVHFV P+S    ++AAG+ +L+L    LKVSL PENPY +N+RRR
Sbjct: 66  IRNFNDYKRVEPHAFVHFVSPESAACAMDAAGQCKLILDGQPLKVSLGPENPYTLNQRRR 125

Query: 181 TKTPFKLSNVVLEIGLLSSRD 243
           T TP KLS + +EIG L SRD
Sbjct: 126 TTTPLKLSGISVEIGTLVSRD 146


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223545464|gb|EEF46969.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 1203

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/81 (58%), Positives = 55/81 (67%)
 Frame = +1

Query: 1   IQKVDEYGKVEAHAFVHFVDPDSVNTLVEAAGKGELVLFNNQLKVSLRPENPYRMNERRR 180
           IQ+VD Y +VE HAFVHF  PDS      AAG  EL      +KVSL PENP+ +N+RRR
Sbjct: 66  IQRVDAYRRVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPENPFHLNQRRR 125

Query: 181 TKTPFKLSNVVLEIGLLSSRD 243
           T  PFKLS+V +EIG L SRD
Sbjct: 126 TTIPFKLSDVHVEIGTLVSRD 146