BLASTX nr result

ID: Atractylodes21_contig00031530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031530
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...    92   4e-17
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...    92   6e-17
emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]    89   5e-16
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]    87   1e-15
ref|XP_003605709.1| hypothetical protein MTR_4g037330 [Medicago ...    86   4e-15

>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 40/80 (50%), Positives = 61/80 (76%)
 Frame = -3

Query: 242  QELSYREQILDEARLHLLKSQHRMKQFADQKRKEANLEVGDFVFLKLRPYRRKSLVVNNN 63
            + L  RE +L   + HL+++QHRMKQFADQ R E   ++GDFV++KL+PYR++S+V+  N
Sbjct: 1297 RSLQERENMLLFLKFHLMRAQHRMKQFADQHRTERTFDIGDFVYVKLQPYRQQSVVLRVN 1356

Query: 62   KKLAARYYGPYRIMNKLGPV 3
            +KL+ +Y+GPY+I+ K G V
Sbjct: 1357 QKLSPKYFGPYKIIEKCGEV 1376


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 39/80 (48%), Positives = 62/80 (77%)
 Frame = -3

Query: 242  QELSYREQILDEARLHLLKSQHRMKQFADQKRKEANLEVGDFVFLKLRPYRRKSLVVNNN 63
            + L  RE +L   + HL+++QHRMKQFADQ R E   E+GD+V++KL+PYR++S+V+  N
Sbjct: 1326 RSLQEREDMLLFLKFHLMRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQSVVMRAN 1385

Query: 62   KKLAARYYGPYRIMNKLGPV 3
            +KL+ +Y+GPY+I+++ G V
Sbjct: 1386 QKLSPKYFGPYKIIDRCGEV 1405


>emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]
          Length = 1259

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 38/79 (48%), Positives = 61/79 (77%)
 Frame = -3

Query: 239  ELSYREQILDEARLHLLKSQHRMKQFADQKRKEANLEVGDFVFLKLRPYRRKSLVVNNNK 60
            +++ R+++L E + HL  + +RMKQ AD+KR+E N EVGD+V+L+L+PYR++S+    + 
Sbjct: 1127 QMTARDELLQELKAHLHAANNRMKQAADKKRREVNFEVGDWVYLRLQPYRQQSVFRRTSH 1186

Query: 59   KLAARYYGPYRIMNKLGPV 3
            KL+ RYYGPY+I  ++GPV
Sbjct: 1187 KLSNRYYGPYQIEERIGPV 1205


>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 38/79 (48%), Positives = 59/79 (74%)
 Frame = -3

Query: 239  ELSYREQILDEARLHLLKSQHRMKQFADQKRKEANLEVGDFVFLKLRPYRRKSLVVNNNK 60
            +++ R ++L E + HL  + +RMKQ AD+KR+E N EVGD+V+L+L+PYR++S+    + 
Sbjct: 1156 QMTARNELLQELKAHLHAANNRMKQAADKKRREVNFEVGDWVYLRLQPYRQQSVFRRTSH 1215

Query: 59   KLAARYYGPYRIMNKLGPV 3
            KL+ RYYGPY I  ++GPV
Sbjct: 1216 KLSNRYYGPYEIEERIGPV 1234


>ref|XP_003605709.1| hypothetical protein MTR_4g037330 [Medicago truncatula]
           gi|355506764|gb|AES87906.1| hypothetical protein
           MTR_4g037330 [Medicago truncatula]
          Length = 638

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 39/79 (49%), Positives = 62/79 (78%)
 Frame = -3

Query: 239 ELSYREQILDEARLHLLKSQHRMKQFADQKRKEANLEVGDFVFLKLRPYRRKSLVVNNNK 60
           EL  R++ L + + HLL++Q +M  +A++KR++ + EVG++VFLKLRP+R++SLV   N+
Sbjct: 486 ELKERDEALLQLKKHLLRAQEQMASYANKKRRDLSFEVGEWVFLKLRPHRQQSLVRRINQ 545

Query: 59  KLAARYYGPYRIMNKLGPV 3
           KLAAR+YGP++I  K+G V
Sbjct: 546 KLAARFYGPFQIEEKIGEV 564


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