BLASTX nr result

ID: Atractylodes21_contig00031523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031523
         (1295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27895.3| unnamed protein product [Vitis vinifera]              219   2e-54
ref|XP_002522601.1| conserved hypothetical protein [Ricinus comm...   212   2e-52
ref|XP_002309215.1| predicted protein [Populus trichocarpa] gi|2...   204   5e-50
ref|XP_003617880.1| Zinc finger CCCH domain-containing protein [...   180   6e-43
ref|NP_200503.1| zinc finger CCCH domain-containing protein 65 [...   179   1e-42

>emb|CBI27895.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score =  219 bits (557), Expect = 2e-54
 Identities = 120/236 (50%), Positives = 155/236 (65%), Gaps = 10/236 (4%)
 Frame = +1

Query: 4   KEKKVTYCRHYMNGRCHEGEKCKFSHDTIPLTKSKPCCHFARHSCMKGDDCPFDHQLSKY 183
           K K VTYCRHY+ GRCHEG+ C+FSHDTIPLTKS PCCHFAR +CMKGDDCPFDHQLS Y
Sbjct: 227 KPKTVTYCRHYLKGRCHEGDHCRFSHDTIPLTKSSPCCHFARGTCMKGDDCPFDHQLSNY 286

Query: 184 PCNNYLTNGFCSRGSDCMFSHEVQPSEASLNASNESKPERKPSSLLDNSGSKKHNNGNVS 363
           PCNNY++ GFCSRG DC+FSH++   E+S  A N  KP  +P SL   S SKK +  N +
Sbjct: 287 PCNNYVSKGFCSRGDDCLFSHKMPLKESSPTAVNVCKPVSEPPSLPSKSYSKKLDM-NGT 345

Query: 364 SREKIDTKSCSVPMSVASNTKQNRVELTPKLSARPPKGISFLSQEKSPL-------EAHT 522
           S +  ++ S SV +   SN ++   E+  K   +  +GI+ LS  KSP+       +  +
Sbjct: 346 SHQNGNSLSHSVGIFPQSNMEKKVAEIVLKPPEQASRGINSLSFGKSPMDYSGKLKQIGS 405

Query: 523 SPKVDAEVKGGEITCRASD-VVQDSKEITKKPPVI--PRGINFLSFGKKPGLDDSN 681
           SP +D   +G E+  + +   VQ+  E  K+ PV   PRGINFLSFGK P L+DS+
Sbjct: 406 SPTMD---EGVEVDKQKNQGEVQNMNEKAKRTPVTVPPRGINFLSFGKAP-LNDSS 457


>ref|XP_002522601.1| conserved hypothetical protein [Ricinus communis]
            gi|223538077|gb|EEF39688.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 932

 Score =  212 bits (539), Expect = 2e-52
 Identities = 130/290 (44%), Positives = 172/290 (59%), Gaps = 17/290 (5%)
 Frame = +1

Query: 4    KEKKVTYCRHYMNGRCHEGEKCKFSHDTIPLTKSKPCCHFARHSCMKGDDCPFDHQLSKY 183
            K K V +CRHY+ GRC EGEKCKFSHDTIPLTKSKPCCHFAR+SC+KGDDCPFDH+LSKY
Sbjct: 485  KPKPVVFCRHYIRGRCQEGEKCKFSHDTIPLTKSKPCCHFARNSCLKGDDCPFDHELSKY 544

Query: 184  PCNNYLTNGFCSRGSDCMFSHEVQPSEASLNASNESKPERKPSSLLDNSGSKKH-NNGNV 360
            PC NY + G CSRG DCMFSH++   E   +ASN   P+    SL   S SKK  ++G +
Sbjct: 545  PCTNYASTGSCSRGDDCMFSHKLPLKEDLPSASNVCTPDLNSPSLPHASNSKKQLDSGGI 604

Query: 361  SSREKIDTKSCSVPMSVASNTKQNRVELTPKLSARP----PKGISFLSQEKSPL--EAHT 522
            S      T   S P +    ++++     PK    P    PKGISFLS  KS +   +H+
Sbjct: 605  SHH----TAKAS-PDTGGGLSRKDTERNVPKGVLGPHVLVPKGISFLSAGKSSVVESSHS 659

Query: 523  SPKVDAEVK------GGEITCRASDVVQDSKEITKKPP--VIPRGINFLSFGKKPGLDDS 678
            +P+  +  +      G +    A+   ++S EI K+ P  +IP GINFLSFG+ P   + 
Sbjct: 660  TPRSSSLSRSEGFKVGNQRDQSAAGSNENSNEIPKRIPAALIPNGINFLSFGRAP--LEF 717

Query: 679  NGGFSFKIGNGIRKSLLSNMEV--EGSKSGSTVNVGDGAKVDTEIGNNSK 822
            +G  +    +G + SL SN +   + S  G+ V VG   K  +E  +NSK
Sbjct: 718  SGTRNLTSDSGAKSSLSSNFDAHKQSSFPGNDVQVG---KETSESVSNSK 764


>ref|XP_002309215.1| predicted protein [Populus trichocarpa] gi|222855191|gb|EEE92738.1|
            predicted protein [Populus trichocarpa]
          Length = 928

 Score =  204 bits (518), Expect = 5e-50
 Identities = 121/273 (44%), Positives = 154/273 (56%), Gaps = 17/273 (6%)
 Frame = +1

Query: 1    IKEKKVTYCRHYMNGRCHEGEKCKFSHDTIPLTKSKPCCHFARHSCMKGDDCPFDHQLSK 180
            + +K V+ CRH++ GRC EG+KCKFSHD IPLTKS+PC HFARH CMKGD+CP+DHQLSK
Sbjct: 480  LNQKPVSPCRHFLKGRCREGQKCKFSHDAIPLTKSEPCHHFARHKCMKGDNCPYDHQLSK 539

Query: 181  YPCNNYLTNGFCSRGSDCMFSHEVQPSEASLNASNESKPERKPSSLLDNSGSKKHNNGNV 360
            YPC NY++ G+C RG  CMFSH+   +  S N SN   P+ KP SL   S SK+    ++
Sbjct: 540  YPCTNYVSKGYCIRGDSCMFSHKEDLASTS-NVSNVCTPKVKPPSLPSTSNSKRQL--DI 596

Query: 361  SSREKIDTKSCSVPMSVASNTKQ---NRVELTPKLSARPPKGISFLS------QEKSPLE 513
            S       K+      V S+ ++   N  +    L A  PKG+SFLS       E SP  
Sbjct: 597  SGTSNQTAKALPDSTGVISDDRRAALNVAKTVQNLPALVPKGLSFLSGGKKSMVESSPKT 656

Query: 514  AHTSPKVDAEVK-GGEITCRASDVVQDSKEITKKPP--VIPRGINFLSFGKKPGLDDSNG 684
            +  S K +  VK G +I   AS  VQ   EI +K P  V P+GINFLSFGK P LD  + 
Sbjct: 657  SSPSLKSNVFVKVGNQIDQCASVTVQSCNEIPRKIPSVVAPKGINFLSFGKAP-LDKCSS 715

Query: 685  -----GFSFKIGNGIRKSLLSNMEVEGSKSGST 768
                   +F  GNG+      N  V      S+
Sbjct: 716  TMKLKSLAFNQGNGVNLFSSKNFAVHEEACSSS 748


>ref|XP_003617880.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355519215|gb|AET00839.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 928

 Score =  180 bits (457), Expect = 6e-43
 Identities = 103/224 (45%), Positives = 135/224 (60%), Gaps = 6/224 (2%)
 Frame = +1

Query: 4    KEKKVTYCRHYMNGRCHEGEKCKFSHDTIPLTKSKPCCHFARHSCMKGDDCPFDHQLSKY 183
            ++ K   CRHYM GRCHEG++C FSHD IPLTKS PC H+A  SCMKG+DCP+DHQLSKY
Sbjct: 498  QKPKPKQCRHYMKGRCHEGDQCNFSHDAIPLTKSVPCAHYACGSCMKGNDCPYDHQLSKY 557

Query: 184  PCNNYLTNGFCSRGSDCMFSHEVQPSEASLNASNESKPERK-PSSLLDNSGSKKHNNGNV 360
            PC+N+++ G C RG  CMFSH+VQ S+     +N  KPE K P S  + + S   NN   
Sbjct: 558  PCSNFVSKGSCYRGR-CMFSHQVQTSQDIPTPTNACKPELKSPLSSGNTNFSTPLNNHGT 616

Query: 361  SSREKIDTKSCSVPMSVASNTKQNRVELTPKLSARPPKGISFLS----QEKSPLEAHTSP 528
             S ++ ++ S  +        K   V  T   SA  PKGI F++       +P +    P
Sbjct: 617  GSVQQTNSNSKGIYSHTNVEHKVTDVSQTKPTSA--PKGIRFINVANLSPTTPKQDTVQP 674

Query: 529  KVDAEVKGGEITCRASDVVQDSKEITKK-PPVIPRGINFLSFGK 657
                 V GG  TC  +D  Q++ EI+KK P V+P+G+NFLSFGK
Sbjct: 675  NKGNLVHGG--TC--ADKGQNTVEISKKIPAVMPKGVNFLSFGK 714


>ref|NP_200503.1| zinc finger CCCH domain-containing protein 65 [Arabidopsis thaliana]
            gi|75264233|sp|Q9LTS7.1|C3H65_ARATH RecName: Full=Zinc
            finger CCCH domain-containing protein 65; Short=AtC3H65;
            AltName: Full=Protein EMBRYO DEFECTIVE 1789
            gi|8777433|dbj|BAA97023.1| unnamed protein product
            [Arabidopsis thaliana] gi|332009441|gb|AED96824.1| zinc
            finger CCCH domain-containing protein 65 [Arabidopsis
            thaliana]
          Length = 675

 Score =  179 bits (455), Expect = 1e-42
 Identities = 115/323 (35%), Positives = 159/323 (49%)
 Frame = +1

Query: 4    KEKKVTYCRHYMNGRCHEGEKCKFSHDTIPLTKSKPCCHFARHSCMKGDDCPFDHQLSKY 183
            K K + YCRHY+ GRCHEG+KCKFSHDTIP TK  PCC+FA  SCMKGDDCPFDH LSKY
Sbjct: 349  KPKPIKYCRHYLKGRCHEGDKCKFSHDTIPETKCSPCCYFATQSCMKGDDCPFDHDLSKY 408

Query: 184  PCNNYLTNGFCSRGSDCMFSHEVQPSEASLNASNESKPERKPSSLLDNSGSKKHNNGNVS 363
            PCNN++T GFC RG  C+FSH+  P  AS            PS+           N  VS
Sbjct: 409  PCNNFITKGFCYRGDSCLFSHKGTPQSAS----------DTPSA-----------NVTVS 447

Query: 364  SREKIDTKSCSVPMSVASNTKQNRVELTPKLSARPPKGISFLSQEKSPLEAHTSPKVDAE 543
            S  KI   S S P      + ++ +   P + AR    ++FL        +H++ +  ++
Sbjct: 448  S-TKITAASFS-PQKTKKQSVRDAIAKLPAIQARVSSSVAFLKP-----SSHSNQRNSSD 500

Query: 544  VKGGEITCRASDVVQDSKEITKKPPVIPRGINFLSFGKKPGLDDSNGGFSFKIGNGIRKS 723
                +I      V        +KP V P+G++FLS  K    D      + K       S
Sbjct: 501  ASSSKIN---EHVTPPQVPPLRKPSVAPKGMSFLSLDKTSQEDTVKASSASKPNTDNSDS 557

Query: 724  LLSNMEVEGSKSGSTVNVGDGAKVDTEIGNNSKQMNSDIPTERPISSQKPMLMLPFMSST 903
                  ++ S+ GS + +G    +      + +Q   +   ++P SS K +   P  SS 
Sbjct: 558  ----QTLKQSQQGSFLPLGPPKGISFLSFASEEQKTLNREPQKPASS-KNLKTTP--SSH 610

Query: 904  SQKALQSTLAFASKFESGVKARG 972
             Q +L S +  A++FES    RG
Sbjct: 611  IQSSLLSAMKLAAEFESAKVERG 633


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