BLASTX nr result

ID: Atractylodes21_contig00031515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031515
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vit...    81   8e-14
gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago trun...    78   8e-13
ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago...    78   8e-13
ref|XP_002511787.1| DNA binding protein, putative [Ricinus commu...    74   9e-12
ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like...    67   1e-09

>ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vitis vinifera]
           gi|296089141|emb|CBI38844.3| unnamed protein product
           [Vitis vinifera]
          Length = 667

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/107 (42%), Positives = 66/107 (61%), Gaps = 9/107 (8%)
 Frame = -1

Query: 408 LMTDEHMYLVMAAFPEKVDQFMQQKESKETKSRKKARAKPALTPEYSSSPTSRSLQLNIT 229
           L+TDE+M LV AAFPE+V++F+ +KE KE+K R K+  +     E   SP S+ +QL+IT
Sbjct: 557 LLTDENMDLVRAAFPEEVNRFLLEKELKESKRRNKSGLRSEGVEEMPDSPKSKGVQLSIT 616

Query: 228 QFYRSSK---------GEGSENLKDSGSTTRNRNAASPNLSKSARRR 115
           +FYRS+K           G+ + +   ++T  R A+   LSKS RRR
Sbjct: 617 EFYRSAKVIFHEKPEDSAGNSDAQGRETSTEKRKASDSKLSKSVRRR 663


>gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago truncatula]
          Length = 547

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 11/109 (10%)
 Frame = -1

Query: 408 LMTDEHMYLVMAAFPEKVDQFMQQKESKETKSRKKARAKPALTPEYSSSPTSRSLQLNIT 229
           L+TDE+M LV AA+PE+V +F Q++E K+ K +K   +      + S+SP S+ +QLNIT
Sbjct: 435 LLTDENMDLVGAAYPEEVKRFRQEQELKDVKRKKNPTSISQENEKSSTSPNSKGVQLNIT 494

Query: 228 QFYRSSK-------GEGSENLK----DSGSTTRNRNAASPNLSKSARRR 115
           +F+ ++K       GE S + K    DSG +   R ++SPN+ KS RRR
Sbjct: 495 EFFPTTKSKHNPKHGEESSSNKNDNQDSGGSKPKRKSSSPNIPKSVRRR 543


>ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago truncatula]
           gi|124360235|gb|ABN08248.1| Helix-hairpin-helix motif,
           class 2 [Medicago truncatula]
           gi|355498862|gb|AES80065.1| Flap endonuclease GEN-like
           protein [Medicago truncatula]
          Length = 612

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 11/109 (10%)
 Frame = -1

Query: 408 LMTDEHMYLVMAAFPEKVDQFMQQKESKETKSRKKARAKPALTPEYSSSPTSRSLQLNIT 229
           L+TDE+M LV AA+PE+V +F Q++E K+ K +K   +      + S+SP S+ +QLNIT
Sbjct: 500 LLTDENMDLVGAAYPEEVKRFRQEQELKDVKRKKNPTSISQENEKSSTSPNSKGVQLNIT 559

Query: 228 QFYRSSK-------GEGSENLK----DSGSTTRNRNAASPNLSKSARRR 115
           +F+ ++K       GE S + K    DSG +   R ++SPN+ KS RRR
Sbjct: 560 EFFPTTKSKHNPKHGEESSSNKNDNQDSGGSKPKRKSSSPNIPKSVRRR 608


>ref|XP_002511787.1| DNA binding protein, putative [Ricinus communis]
           gi|223548967|gb|EEF50456.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 609

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 11/109 (10%)
 Frame = -1

Query: 408 LMTDEHMYLVMAAFPEKVDQFMQQKESKETKSRKKARAKPALTPEYSSSPTSRSLQLNIT 229
           L+TDE+M LV  AFP+ VD+F+++KE KE+K R  +      + E S S  S+ +QLNIT
Sbjct: 504 LLTDENMDLVQNAFPDAVDKFLKEKEQKESKRRLSS------STEKSESVKSKGVQLNIT 557

Query: 228 QFYRSSK-----------GEGSENLKDSGSTTRNRNAASPNLSKSARRR 115
           +FYRS+K            + SEN +D   +T  R  +S NL KS RRR
Sbjct: 558 EFYRSTKVQFAASGGEEQADCSEN-QDDVISTEKRKISSSNLPKSVRRR 605


>ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
           gi|449472478|ref|XP_004153607.1| PREDICTED: flap
           endonuclease GEN-like 1-like [Cucumis sativus]
           gi|449516535|ref|XP_004165302.1| PREDICTED: flap
           endonuclease GEN-like 1-like [Cucumis sativus]
          Length = 606

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/105 (40%), Positives = 65/105 (61%), Gaps = 7/105 (6%)
 Frame = -1

Query: 408 LMTDEHMYLVMAAFPEKVDQFMQQKESKETKSRKKARAKPAL-TPEYSSSPTSRSLQLNI 232
           L+TDE+M LV AA+PE+  +F+Q+KE K    R+K  + PA  T   S S  ++ +QL+I
Sbjct: 502 LLTDENMELVAAAYPEQAAKFLQEKEMK----RQKTPSTPACETSGKSDSSKAKGVQLSI 557

Query: 231 TQFYRSSKGEGSENLKD------SGSTTRNRNAASPNLSKSARRR 115
           T+FYR++K + + +  D        ST + + ++S  LSKS RRR
Sbjct: 558 TEFYRATKTQQTADTTDLTNEDEETSTGKRKASSSSTLSKSVRRR 602


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