BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031493
         (198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269045.1| PREDICTED: transcription initiation factor I...    58   7e-07
ref|XP_002284342.1| PREDICTED: transcription initiation factor I...    58   7e-07
gb|ABR16853.1| unknown [Picea sitchensis]                              58   9e-07
ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidop...    57   2e-06
ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabi...    57   2e-06

>ref|XP_002269045.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|296088031|emb|CBI35314.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 42/112 (37%), Positives = 51/112 (45%), Gaps = 48/112 (42%)
 Frame = -3

Query: 196 SDCRKNTDVVFYN--GDAVCCECGLVLEWGNDESPESEW--------------------- 86
           +DC+KNT+VVF +  GD VC ECGLVLE  +     SEW                     
Sbjct: 7   TDCKKNTEVVFDHSAGDTVCSECGLVLE-SHSIDETSEWRTFANESGDNDPVRVGGPSNP 65

Query: 85  -------VTVISNPNG------------------NPDRSMIMAFETIATMSD 5
                   TVI+ PNG                  NPDR +I+AF+TIATMSD
Sbjct: 66  LLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSD 117


>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|297739630|emb|CBI29812.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 42/112 (37%), Positives = 51/112 (45%), Gaps = 48/112 (42%)
 Frame = -3

Query: 196 SDCRKNTDVVFYN--GDAVCCECGLVLEWGNDESPESEW--------------------- 86
           +DC+KNT+VVF +  GD VC ECGLVLE  +     SEW                     
Sbjct: 7   TDCKKNTEVVFDHSAGDTVCSECGLVLE-SHSIDETSEWRTFANESGDNDPVRVGGPSNP 65

Query: 85  -------VTVISNPNG------------------NPDRSMIMAFETIATMSD 5
                   TVI+ PNG                  NPDR +I+AF+TIATMSD
Sbjct: 66  LLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSD 117


>gb|ABR16853.1| unknown [Picea sitchensis]
          Length = 313

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 43/111 (38%), Positives = 49/111 (44%), Gaps = 48/111 (43%)
 Frame = -3

Query: 193 DCRKNTDVVFYN--GDAVCCECGLVLEWGNDESPESEW---------------------- 86
           DC+K T+VVF +  GD VC ECGLVLE  +     SEW                      
Sbjct: 9   DCKKQTEVVFDHSAGDTVCVECGLVLE-AHSIDETSEWRTFANETGDNDPVRVGGPSNPL 67

Query: 85  ------VTVISNPNG------------------NPDRSMIMAFETIATMSD 5
                  TVIS PNG                  NPDRS+IMAF+TI TMSD
Sbjct: 68  LTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIMAFKTIGTMSD 118


>ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidopsis thaliana]
           gi|21363045|sp|Q9SS44.1|TF2B2_ARATH RecName:
           Full=Transcription initiation factor IIB-2; AltName:
           Full=General transcription factor TFIIB-2;
           Short=AtTFIIB2 gi|6056193|gb|AAF02810.1|AC009400_6
           transcription initiation factor IIB (TFIIB) [Arabidopsis
           thaliana] gi|15215784|gb|AAK91437.1| AT3g10330/F14P13_7
           [Arabidopsis thaliana] gi|16974427|gb|AAL31139.1|
           AT3g10330/F14P13_7 [Arabidopsis thaliana]
           gi|21593436|gb|AAM65403.1| transcription initiation
           factor IIB (TFIIB) [Arabidopsis thaliana]
           gi|39545880|gb|AAR28003.1| TFIIB2 [Arabidopsis thaliana]
           gi|332641371|gb|AEE74892.1| transcription initiation
           factor IIB-2 [Arabidopsis thaliana]
          Length = 312

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 41/112 (36%), Positives = 51/112 (45%), Gaps = 48/112 (42%)
 Frame = -3

Query: 196 SDCRKNTDVVFYN--GDAVCCECGLVLEWGNDESPESEW--------------------- 86
           SDC+++T+VVF +  GD VC ECGLVLE  +     SEW                     
Sbjct: 7   SDCKRHTEVVFDHSAGDTVCSECGLVLE-SHSIDETSEWRTFANESGDNDPVRVGGPTNP 65

Query: 85  -------VTVISNPNG------------------NPDRSMIMAFETIATMSD 5
                   TVIS PNG                  NPDR +I+AF+TIATM+D
Sbjct: 66  LLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMAD 117


>ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabidopsis lyrata subsp.
           lyrata] gi|297328501|gb|EFH58920.1| transcription
           initiation factor IIB-2 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 312

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 41/112 (36%), Positives = 51/112 (45%), Gaps = 48/112 (42%)
 Frame = -3

Query: 196 SDCRKNTDVVFYN--GDAVCCECGLVLEWGNDESPESEW--------------------- 86
           SDC+++T+VVF +  GD VC ECGLVLE  +     SEW                     
Sbjct: 7   SDCKRHTEVVFDHSAGDTVCSECGLVLE-SHSIDETSEWRTFANESGDNDPVRVGGPTNP 65

Query: 85  -------VTVISNPNG------------------NPDRSMIMAFETIATMSD 5
                   TVIS PNG                  NPDR +I+AF+TIATM+D
Sbjct: 66  LLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMAD 117