BLASTX nr result

ID: Atractylodes21_contig00031431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031431
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526300.1| PREDICTED: putative cyclin-D6-1-like [Glycin...    85   5e-15
emb|CBI18003.3| unnamed protein product [Vitis vinifera]               85   7e-15
ref|XP_002276869.1| PREDICTED: putative cyclin-D6-1 [Vitis vinif...    85   7e-15
ref|NP_192236.1| cyclin D6-1 [Arabidopsis thaliana] gi|75315709|...    84   1e-14
gb|AEV41137.1| D6-type cyclin [Populus x canadensis]                   84   2e-14

>ref|XP_003526300.1| PREDICTED: putative cyclin-D6-1-like [Glycine max]
          Length = 329

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/73 (54%), Positives = 55/73 (75%), Gaps = 4/73 (5%)
 Frame = -2

Query: 209 KPWILKLVAVSCVSLAVKMISPDSRLSDHV----QKDGDLMFDFGIVERMEFVILGALQW 42
           KPW+L+L+AVSC+SLAVKM+  +   +D      Q DG ++F+   ++RME +ILGALQW
Sbjct: 86  KPWVLRLIAVSCISLAVKMMRTEYPFTDVQALLNQSDGGIIFETQTIQRMEALILGALQW 145

Query: 41  RMRSITPFAFIGF 3
           RMRSITPF+F+ F
Sbjct: 146 RMRSITPFSFVAF 158


>emb|CBI18003.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/70 (58%), Positives = 53/70 (75%)
 Frame = -2

Query: 212 EKPWILKLVAVSCVSLAVKMISPDSRLSDHVQKDGDLMFDFGIVERMEFVILGALQWRMR 33
           EKPWIL+L+AVSCVSLA KM   +  L+D  Q +G  +FD   + RME ++LGAL+WRMR
Sbjct: 88  EKPWILRLLAVSCVSLAAKMKKTEFSLADF-QGEGGFIFDSETIMRMEILVLGALKWRMR 146

Query: 32  SITPFAFIGF 3
           S+TPF+FI F
Sbjct: 147 SVTPFSFISF 156


>ref|XP_002276869.1| PREDICTED: putative cyclin-D6-1 [Vitis vinifera]
          Length = 294

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/70 (58%), Positives = 53/70 (75%)
 Frame = -2

Query: 212 EKPWILKLVAVSCVSLAVKMISPDSRLSDHVQKDGDLMFDFGIVERMEFVILGALQWRMR 33
           EKPWIL+L+AVSCVSLA KM   +  L+D  Q +G  +FD   + RME ++LGAL+WRMR
Sbjct: 88  EKPWILRLLAVSCVSLAAKMKKTEFSLADF-QGEGGFIFDSETIMRMEILVLGALKWRMR 146

Query: 32  SITPFAFIGF 3
           S+TPF+FI F
Sbjct: 147 SVTPFSFISF 156


>ref|NP_192236.1| cyclin D6-1 [Arabidopsis thaliana]
           gi|75315709|sp|Q9ZR04.1|CCD61_ARATH RecName:
           Full=Putative cyclin-D6-1; AltName: Full=G1/S-specific
           cyclin-D6-1; Short=CycD6;1 gi|4262155|gb|AAD14455.1|
           putative D-type cyclin [Arabidopsis thaliana]
           gi|7270197|emb|CAB77812.1| putative D-type cyclin
           [Arabidopsis thaliana] gi|332656900|gb|AEE82300.1|
           cyclin D6-1 [Arabidopsis thaliana]
          Length = 302

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/69 (59%), Positives = 55/69 (79%)
 Frame = -2

Query: 209 KPWILKLVAVSCVSLAVKMISPDSRLSDHVQKDGDLMFDFGIVERMEFVILGALQWRMRS 30
           KPWILKL+++SCVSL+ KM  PD  +SD +  +G+  FD  ++ERME VILGAL+WRMRS
Sbjct: 98  KPWILKLISLSCVSLSAKMRKPDMSVSD-LPVEGEF-FDAQMIERMENVILGALKWRMRS 155

Query: 29  ITPFAFIGF 3
           +TPF+F+ F
Sbjct: 156 VTPFSFLAF 164


>gb|AEV41137.1| D6-type cyclin [Populus x canadensis]
          Length = 324

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/69 (57%), Positives = 53/69 (76%)
 Frame = -2

Query: 209 KPWILKLVAVSCVSLAVKMISPDSRLSDHVQKDGDLMFDFGIVERMEFVILGALQWRMRS 30
           KPW+LKL+AV+CVSLA KM   +  ++D +Q DG  +FD   +++ME +ILGAL WRMRS
Sbjct: 89  KPWVLKLLAVACVSLAAKMKEAEFYVTD-IQGDGGFVFDPQTIQKMEVLILGALNWRMRS 147

Query: 29  ITPFAFIGF 3
           ITPF+FI F
Sbjct: 148 ITPFSFISF 156


Top