BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031352
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532772.1| pentatricopeptide repeat-containing protein,...   117   1e-24
ref|NP_171855.1| pentatricopeptide repeat-containing protein [Ar...   113   2e-23
ref|XP_002892169.1| pentatricopeptide repeat-containing protein ...   113   2e-23
dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]           113   2e-23
emb|CBI28908.3| unnamed protein product [Vitis vinifera]              110   1e-22

>ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527482|gb|EEF29611.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 647

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/112 (52%), Positives = 79/112 (70%), Gaps = 3/112 (2%)
 Frame = +2

Query: 2   HNSPEPDSNLLFISNPRWVFTATSPPPPEWVQPINDTSNLIT-SHPKL--SPWVDQILNL 172
           +N+ E  S L   SN RWVFT+ S PPPEW+ P  D S++ + +H  L  SPWV+QIL L
Sbjct: 25  YNNGESLSKLCLTSNRRWVFTSNSLPPPEWIDPFVDLSDVASRTHQDLKPSPWVNQILAL 84

Query: 173 LDDDTTQMEIKLDAFCHRWFIRLSPSFVSYILKSDRVKNQPDLALRFFKWAG 328
           LD  ++ ME  LD FCH + I+LSPSFVS+IL+S  ++ +PD+A+RFF WAG
Sbjct: 85  LDG-SSNMESNLDTFCHMFLIKLSPSFVSFILRSTELQTKPDVAIRFFTWAG 135


>ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial; Flags: Precursor
           gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18
           [Arabidopsis thaliana] gi|332189465|gb|AEE27586.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 660

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/94 (54%), Positives = 70/94 (74%), Gaps = 2/94 (2%)
 Frame = +2

Query: 50  RWVFTATSPPPPEWVQPINDTSNLITSHPKL--SPWVDQILNLLDDDTTQMEIKLDAFCH 223
           RWVF ++S PPPEW++P ND S+L+ S+  L  SPWV QILNLLD   + ME  LD FC 
Sbjct: 50  RWVFNSSSLPPPEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLDGSAS-MESNLDGFCR 108

Query: 224 RWFIRLSPSFVSYILKSDRVKNQPDLALRFFKWA 325
           ++ I+LSP+FVS++LKSD ++ +PD+A  FF W+
Sbjct: 109 KFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWS 142


>ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338011|gb|EFH68428.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 662

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/94 (54%), Positives = 70/94 (74%), Gaps = 2/94 (2%)
 Frame = +2

Query: 50  RWVFTATSPPPPEWVQPINDTSNLITSHPKL--SPWVDQILNLLDDDTTQMEIKLDAFCH 223
           RWVF ++S PPPEW++P ND S+L+ S+  L  SPWV QILNLLD   + ME  LD FC 
Sbjct: 50  RWVFNSSSLPPPEWIEPFNDVSDLVKSNRNLQPSPWVSQILNLLDGSAS-MESNLDGFCR 108

Query: 224 RWFIRLSPSFVSYILKSDRVKNQPDLALRFFKWA 325
           ++ I+LSP+FVS++LKSD ++ +PD+A  FF W+
Sbjct: 109 KFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWS 142


>dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
          Length = 642

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/94 (54%), Positives = 70/94 (74%), Gaps = 2/94 (2%)
 Frame = +2

Query: 50  RWVFTATSPPPPEWVQPINDTSNLITSHPKL--SPWVDQILNLLDDDTTQMEIKLDAFCH 223
           RWVF ++S PPPEW++P ND S+L+ S+  L  SPWV QILNLLD   + ME  LD FC 
Sbjct: 32  RWVFNSSSLPPPEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLDGSAS-MESNLDGFCR 90

Query: 224 RWFIRLSPSFVSYILKSDRVKNQPDLALRFFKWA 325
           ++ I+LSP+FVS++LKSD ++ +PD+A  FF W+
Sbjct: 91  KFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWS 124


>emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/97 (53%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
 Frame = +2

Query: 41  SNPRWVFTATSPPPPEWVQPINDTSNLITS-HPKLSPWVDQILNLLDDDTTQMEIKLDAF 217
           SN RWVFT  +P PPEWV+P+ D S+L ++  P+ SPWV+QIL LLD  +  ME  LD++
Sbjct: 53  SNSRWVFT--TPIPPEWVEPLYDLSDLASNPQPQPSPWVNQILKLLDG-SVNMESNLDSY 109

Query: 218 CHRWFIRLSPSFVSYILKSDRVKNQPDLALRFFKWAG 328
           C ++ I+LSP+FV+++LKSD ++ +PD+A RFF WAG
Sbjct: 110 CSKFLIKLSPNFVAFVLKSDAIRGKPDIAFRFFWWAG 146