BLASTX nr result

ID: Atractylodes21_contig00031294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031294
         (190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329330.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
gb|ABD96879.1| hypothetical protein [Cleome spinosa]                   93   3e-17
ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23...    92   6e-17
gb|ABD96960.1| hypothetical protein [Cleome spinosa]                   89   3e-16
dbj|BAC76393.1| RAD23-like protein [Arabidopsis thaliana]              87   1e-15

>ref|XP_002329330.1| predicted protein [Populus trichocarpa] gi|222870784|gb|EEF07915.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/70 (68%), Positives = 51/70 (72%), Gaps = 7/70 (10%)
 Frame = -1

Query: 190 PEQAEVPLVVQAPAGGAARNPPS-------PTLGGPNANPLDIFPQGLPNVGSNASAGTL 32
           PEQAEVP V Q PA G A NPP+       P  GGPNANPLD+FPQGLP+ GSNA AG L
Sbjct: 201 PEQAEVPPVAQGPASGVAVNPPAQAQQPAAPPSGGPNANPLDLFPQGLPSTGSNAGAGNL 260

Query: 31  DVLRNSQQFQ 2
           D LRNSQQFQ
Sbjct: 261 DFLRNSQQFQ 270


>gb|ABD96879.1| hypothetical protein [Cleome spinosa]
          Length = 383

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 51/73 (69%), Positives = 53/73 (72%), Gaps = 10/73 (13%)
 Frame = -1

Query: 190 PEQAEVPLVVQAPA-GGAARNPPS---------PTLGGPNANPLDIFPQGLPNVGSNASA 41
           PEQAEVP V QAPA GG   NPP+         PT  GPNANPLD+FPQGLPNVGSN  A
Sbjct: 196 PEQAEVPPVAQAPASGGQPTNPPAQAGQQPAAAPT-SGPNANPLDLFPQGLPNVGSNTGA 254

Query: 40  GTLDVLRNSQQFQ 2
           GTLD LRNSQQFQ
Sbjct: 255 GTLDFLRNSQQFQ 267


>ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23-3 [Vitis vinifera]
           gi|297737829|emb|CBI27030.3| unnamed protein product
           [Vitis vinifera]
          Length = 397

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 48/71 (67%), Positives = 53/71 (74%), Gaps = 8/71 (11%)
 Frame = -1

Query: 190 PEQAEVPLVVQAPAGGAARNPPSPTL-------GGPNANPLDIFPQGLPNVGSN-ASAGT 35
           PEQAEVP V +APA G A NPP+ +         GPNANPLD+FPQG+PNVGSN A AGT
Sbjct: 212 PEQAEVPPVARAPASGQAANPPAQSQQPVPAPSSGPNANPLDLFPQGIPNVGSNPAGAGT 271

Query: 34  LDVLRNSQQFQ 2
           LD LRNSQQFQ
Sbjct: 272 LDFLRNSQQFQ 282


>gb|ABD96960.1| hypothetical protein [Cleome spinosa]
          Length = 435

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/72 (65%), Positives = 51/72 (70%), Gaps = 9/72 (12%)
 Frame = -1

Query: 190 PEQAEVPLVVQAPA-GGAARNPPSPT--------LGGPNANPLDIFPQGLPNVGSNASAG 38
           PEQAEVP V + PA GG   NPP+ +          GPNANPLD+FPQGLPNVGSN  AG
Sbjct: 248 PEQAEVPPVTRPPASGGQPTNPPAQSQQQPAVAPTSGPNANPLDLFPQGLPNVGSNTGAG 307

Query: 37  TLDVLRNSQQFQ 2
           TLD LRNSQQFQ
Sbjct: 308 TLDFLRNSQQFQ 319


>dbj|BAC76393.1| RAD23-like protein [Arabidopsis thaliana]
          Length = 337

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/71 (64%), Positives = 49/71 (69%), Gaps = 8/71 (11%)
 Frame = -1

Query: 190 PEQAEVPLVVQAPAG-GAARNPPSPT-------LGGPNANPLDIFPQGLPNVGSNASAGT 35
           PEQAEVP V + PA  G   NPP+ T         GPNANPLD+FPQGLPNVG N  AGT
Sbjct: 148 PEQAEVPPVARPPASAGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNVGGNPGAGT 207

Query: 34  LDVLRNSQQFQ 2
           LD LRNSQQFQ
Sbjct: 208 LDFLRNSQQFQ 218


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