BLASTX nr result

ID: Atractylodes21_contig00031276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031276
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni...   332   1e-88
ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|2...   311   2e-82
ref|XP_004171728.1| PREDICTED: tRNA-splicing endonuclease subuni...   310   5e-82
gb|ABK93461.1| unknown [Populus trichocarpa]                          310   5e-82
ref|XP_004149565.1| PREDICTED: tRNA-splicing endonuclease subuni...   309   7e-82

>ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis vinifera]
          Length = 242

 Score =  332 bits (850), Expect = 1e-88
 Identities = 157/236 (66%), Positives = 193/236 (81%), Gaps = 2/236 (0%)
 Frame = -3

Query: 1105 MGPRWKGKGWEAKALAIPISRSILNLQASLTKSNSQGILSGCSVLLPSNAEQTDLLNQTC 926
            MGPRWKGKG EAKALA P+S  +  LQ+SLT+S+SQG+LSGCSVLL + AEQT+LLN++C
Sbjct: 1    MGPRWKGKGAEAKALAEPMSEIVSQLQSSLTRSDSQGLLSGCSVLLEAGAEQTELLNRSC 60

Query: 925  FGRPIITVDNDNQWFQLTLEEAFYLCFSLKCIKIADGDNSVKTHDQLWEYMISKTVSFPA 746
            FGRP+IT + D QWFQL++EEAFYLC SL C+KI   DN +K  ++LW+YM S+  +FP 
Sbjct: 61   FGRPVITAEKDKQWFQLSMEEAFYLCHSLGCLKIVGEDNHLKNDEELWQYMKSRRETFPD 120

Query: 745  FFKAYSHLRNKNWVVRSGCQYGVDFVAYRHHPSLVHSEYGVMVFSE--RNGDDRLRVWSD 572
            F+ AYSHLR KNWVVRSG QYGVDFVAYRHHP+LVHSEY V+V SE   N + RLRVWSD
Sbjct: 121  FYMAYSHLRIKNWVVRSGSQYGVDFVAYRHHPALVHSEYAVLVLSEENENANGRLRVWSD 180

Query: 571  FQCTLRLCGSVAKTLLILNMNRNCENSIASPSCLDGYSVEERTITRWNSERCREDQ 404
            F CT+RLCGSVAKTLL++++N+N  +   +P CL  YSVEERTITRW++E+CRE Q
Sbjct: 181  FDCTIRLCGSVAKTLLVIHINKN-GHGATTPLCLKKYSVEERTITRWSAEQCREVQ 235


>ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|222850135|gb|EEE87682.1|
            predicted protein [Populus trichocarpa]
          Length = 235

 Score =  311 bits (797), Expect = 2e-82
 Identities = 157/235 (66%), Positives = 183/235 (77%), Gaps = 1/235 (0%)
 Frame = -3

Query: 1105 MGPRWKGKGWEAKALAIPISRSILNLQASLTKSNSQGILSGCSVLLPSNAEQTDLLNQTC 926
            MGPRWKGKG EAKALA P+S  +  LQ+SL +SN+   LSGCSVLL    EQT+LL + C
Sbjct: 1    MGPRWKGKGAEAKALADPMSEIVSQLQSSLLQSNACASLSGCSVLLAVETEQTELLTRAC 60

Query: 925  FGRPIITVDNDNQWFQLTLEEAFYLCFSLKCIKIADGDNSVKTHDQLWEYMISKTVSFPA 746
            FG+PIIT + + QWFQL LEEAFYLC+SLKC+KIA  DN VK    LW YM  K   FP 
Sbjct: 61   FGKPIITAEKEKQWFQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLKKEKFPD 120

Query: 745  FFKAYSHLRNKNWVVRSGCQYGVDFVAYRHHPSLVHSEYGVMVFSERNGD-DRLRVWSDF 569
            F+KAYSHLR KNWV+R G QYGVDFVAY+HHPSLVHSEY V+V SE  GD  RLRVWSDF
Sbjct: 121  FYKAYSHLRMKNWVLRPGLQYGVDFVAYQHHPSLVHSEYAVIVLSE--GDTGRLRVWSDF 178

Query: 568  QCTLRLCGSVAKTLLILNMNRNCENSIASPSCLDGYSVEERTITRWNSERCREDQ 404
             CT+RLCGSVAKTLLILN+++N   +I SPSCL+ YSVEE TITRW+ E+ R+D+
Sbjct: 179  HCTIRLCGSVAKTLLILNVDKNGHGAI-SPSCLERYSVEECTITRWSPEQSRDDK 232


>ref|XP_004171728.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-2-like [Cucumis
            sativus]
          Length = 281

 Score =  310 bits (793), Expect = 5e-82
 Identities = 147/236 (62%), Positives = 180/236 (76%), Gaps = 3/236 (1%)
 Frame = -3

Query: 1105 MGPRWKGKGWEAKALAIPISRSILNLQASLTKSNSQGILSGCSVLLPSNAEQTDLLNQTC 926
            M PRWKGK  EAKALA PIS ++L+LQ+S   SN+QG+LSG  +L  ++ EQTDLLN+TC
Sbjct: 43   MAPRWKGKASEAKALADPISNTVLHLQSSFIHSNAQGLLSGSIILYLADEEQTDLLNRTC 102

Query: 925  FGRPIITVDNDNQWFQLTLEEAFYLCFSLKCIKIADGDNSVKTHDQLWEYMISKTVSFPA 746
            FGRPI+T + D QWFQ  +EEAFYL + L C+KI DG +  K   +LW YM ++  +FP 
Sbjct: 103  FGRPILTAEKDKQWFQFGMEEAFYLSYHLNCLKIVDGQDCEKNFQELWRYMKTQKATFPE 162

Query: 745  FFKAYSHLRNKNWVVRSGCQYGVDFVAYRHHPSLVHSEYGVMVFSE---RNGDDRLRVWS 575
            F+ AY HLR KNWVVR G QYGVDFVAYRHHPSLVHSE+ V+V  E    NG+ RLRVWS
Sbjct: 163  FYIAYRHLRLKNWVVRPGSQYGVDFVAYRHHPSLVHSEFAVLVLCEATDSNGNGRLRVWS 222

Query: 574  DFQCTLRLCGSVAKTLLILNMNRNCENSIASPSCLDGYSVEERTITRWNSERCRED 407
            DF CT+RLCGSVAKTLL+L +N N  +   SPSCLD YS+EERT+TRW+ E+CRE+
Sbjct: 223  DFLCTVRLCGSVAKTLLVLTVNDN-GSGFVSPSCLDSYSIEERTVTRWSPEQCREN 277


>gb|ABK93461.1| unknown [Populus trichocarpa]
          Length = 235

 Score =  310 bits (793), Expect = 5e-82
 Identities = 156/235 (66%), Positives = 183/235 (77%), Gaps = 1/235 (0%)
 Frame = -3

Query: 1105 MGPRWKGKGWEAKALAIPISRSILNLQASLTKSNSQGILSGCSVLLPSNAEQTDLLNQTC 926
            MGPRWKGKG EAKALA P+S  +  LQ+SL +SN+   LSGCSVLL    E+T+LL + C
Sbjct: 1    MGPRWKGKGAEAKALADPMSEIVSQLQSSLLQSNACASLSGCSVLLAVETEKTELLTRAC 60

Query: 925  FGRPIITVDNDNQWFQLTLEEAFYLCFSLKCIKIADGDNSVKTHDQLWEYMISKTVSFPA 746
            FG+PIIT + + QWFQL LEEAFYLC+SLKC+KIA  DN VK    LW YM  K   FP 
Sbjct: 61   FGKPIITAEKEKQWFQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLKKEKFPD 120

Query: 745  FFKAYSHLRNKNWVVRSGCQYGVDFVAYRHHPSLVHSEYGVMVFSERNGD-DRLRVWSDF 569
            F+KAYSHLR KNWV+R G QYGVDFVAY+HHPSLVHSEY V+V SE  GD  RLRVWSDF
Sbjct: 121  FYKAYSHLRMKNWVLRPGLQYGVDFVAYQHHPSLVHSEYAVIVLSE--GDTGRLRVWSDF 178

Query: 568  QCTLRLCGSVAKTLLILNMNRNCENSIASPSCLDGYSVEERTITRWNSERCREDQ 404
             CT+RLCGSVAKTLLILN+++N   +I SPSCL+ YSVEE TITRW+ E+ R+D+
Sbjct: 179  HCTIRLCGSVAKTLLILNVDKNGHGAI-SPSCLERYSVEECTITRWSPEQSRDDK 232


>ref|XP_004149565.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-2-like [Cucumis
            sativus]
          Length = 281

 Score =  309 bits (792), Expect = 7e-82
 Identities = 147/236 (62%), Positives = 180/236 (76%), Gaps = 3/236 (1%)
 Frame = -3

Query: 1105 MGPRWKGKGWEAKALAIPISRSILNLQASLTKSNSQGILSGCSVLLPSNAEQTDLLNQTC 926
            M PRWKGK  EAKALA PIS ++L+LQ+S   SN+QG+LSG  +L  ++ EQTDLLN+TC
Sbjct: 43   MAPRWKGKASEAKALADPISNTLLHLQSSFIHSNAQGLLSGSIILYLADEEQTDLLNRTC 102

Query: 925  FGRPIITVDNDNQWFQLTLEEAFYLCFSLKCIKIADGDNSVKTHDQLWEYMISKTVSFPA 746
            FGRPI+T + D QWFQ  +EEAFYL + L C+KI DG +  K   +LW YM ++  +FP 
Sbjct: 103  FGRPILTAEKDKQWFQFGMEEAFYLSYHLNCLKIVDGQDCEKNFQELWRYMKTQKATFPE 162

Query: 745  FFKAYSHLRNKNWVVRSGCQYGVDFVAYRHHPSLVHSEYGVMVFSE---RNGDDRLRVWS 575
            F+ AY HLR KNWVVR G QYGVDFVAYRHHPSLVHSE+ V+V  E    NG+ RLRVWS
Sbjct: 163  FYIAYRHLRLKNWVVRPGSQYGVDFVAYRHHPSLVHSEFAVLVLCEGRDSNGNGRLRVWS 222

Query: 574  DFQCTLRLCGSVAKTLLILNMNRNCENSIASPSCLDGYSVEERTITRWNSERCRED 407
            DF CT+RLCGSVAKTLL+L +N N  +   SPSCLD YS+EERT+TRW+ E+CRE+
Sbjct: 223  DFLCTVRLCGSVAKTLLVLTVNDN-GSGFVSPSCLDSYSIEERTVTRWSPEQCREN 277


Top