BLASTX nr result

ID: Atractylodes21_contig00031239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031239
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...    37   2e-06
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ...    37   2e-06

>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score = 36.6 bits (83), Expect(3) = 2e-06
 Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 10/62 (16%)
 Frame = +2

Query: 5   KLINKFYRTG*NML*FSGQYVGP----HAHKISVAEM*MLR*ICGHAMR------DIHEK 154
           KL  KFYRT        G    P    H  ++ VAEM MLR +CGH  R      DI ++
Sbjct: 423 KLKGKFYRTAIRPAILYGAECWPTKRRHVQQLGVAEMRMLRWMCGHTRRDRVRNDDIRDR 482

Query: 155 VG 160
           VG
Sbjct: 483 VG 484



 Score = 35.8 bits (81), Expect(3) = 2e-06
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = +1

Query: 280 EVVIRDLSEWNILKELALNRSA*KYAI 360
           E V RDL  WNI KELA+NR+A K AI
Sbjct: 536 ESVKRDLKGWNITKELAMNRAAWKLAI 562



 Score = 23.9 bits (50), Expect(3) = 2e-06
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 11/56 (19%)
 Frame = +3

Query: 153 R*GVAKRSRKH*EHCMRWF-----RLLNAAV------TICC*ERGRG*STLTWGSS 287
           R GVA  + K  +H +RWF     R L+A V           +RGRG   LTW  S
Sbjct: 482 RVGVAPIAEKLVQHRLRWFGHIQRRPLDAPVHSGRLKRAGNVKRGRGRPNLTWEES 537


>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
           jockey-like [Brachypodium distachyon]
          Length = 307

 Score = 36.6 bits (83), Expect(3) = 2e-06
 Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 10/62 (16%)
 Frame = +2

Query: 5   KLINKFYRTG*NML*FSGQYVGP----HAHKISVAEM*MLR*ICGHAMR------DIHEK 154
           KL  KFYRT        G    P    H  ++ VAEM MLR +CGH  R      DI ++
Sbjct: 163 KLKGKFYRTAIRPAILYGAECWPTKRRHVQQLGVAEMRMLRWMCGHTRRDHVRNDDIRDR 222

Query: 155 VG 160
           VG
Sbjct: 223 VG 224



 Score = 35.8 bits (81), Expect(3) = 2e-06
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = +1

Query: 280 EVVIRDLSEWNILKELALNRSA*KYAI 360
           E V RDL  WNI KELA+NR+A K AI
Sbjct: 276 ESVKRDLKGWNITKELAMNRTAWKLAI 302



 Score = 23.9 bits (50), Expect(3) = 2e-06
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 11/56 (19%)
 Frame = +3

Query: 153 R*GVAKRSRKH*EHCMRWF-----RLLNAAV------TICC*ERGRG*STLTWGSS 287
           R GVA  + K  +H +RWF     R L+A V           +RGRG   LTW  S
Sbjct: 222 RVGVAPIAEKLVQHRLRWFGHIQRRPLDAPVHSGRLKRAGNVKRGRGRPNLTWEES 277


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